Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1793 ATGCTTGGGACCGCCCTGCAGTTTGGGGGTGTTCGCGGTAAGGATCGGTTTTACATTCCGGTGAAGGCAAGGAAGAGCCTGAGTCAGCGTGAACAAGCACAGAAAGCTAAGAGCGGGGAAACTGTGTCAGCTGATTCAACTCCAAAGGCCAAAGATGTTGCTTCTGAGAATAAGAATTCCAGTGAGCCTTCATATTCGTCGACAAAACCTTCTTCTTGTCCTTCGTTAATGCCTGCTTGTAATATTGATAGGTTTCTGGAGTCTACGAGGCCATTGGTCCCCGCTCAGTACTTTTCTAAGACAACAATGAGAGGCTGGAAAACTTGTGATGTTGAGTATCAGTCTTACTTCACCCTTAATGATCTCTGGGAATCGTTGAAGGAGTGGAGTGTATATGGGGCAGGAGTCCCTTTGGTACTTGATCAAAGTGAATCTGTTGTTCAATATTACGTTCCTTACTTGTCGGGTATCCAACTATACAGTCAATCTGCTGAGAAGTCAAATGCCAAGCCAAGGTATGTTGGTGAAGATAGTGATTGTGATTCCTATAGGGATTCAAGTAGTGATGGAAGCAGCGACTTTGAAATAGGAAAAAATACTGAACTATCTGCAGCACAGAGAAGTCGTCAACATCTTACAGGTGATGTCTCTTTACGTATGAGGGGGCTGTCTGTCCGTGATAAACACAATGCAATGCAAGAAGGCTTTTCTAGCGATGACAGTGAAACAGGAAATCCCCAAGATCTTCTTGTTTTTGAGTATTTTGAACATGAACCTCCTTATAGCCGCGAACCACTGGCTGACAAGATAATAGATCTTTCACGCCATTATCCTGGCCTCAAGTCATTGAGAAGCTGTGATTTATTGCCTTCCAGCTGGATGTCTGTGGCGTGGTATCCCATCTACCGCATACCCACAGGTCCAACATTAAAAGATTTGGATGCCTGCTTTCTGACATACCATTCACTCCATACACCCTTGACAGGAAGTGGACTAACTCAGGCTCAGACTCCAACATTGGTTTTTCCCAATGACATGGATGGAGAACCAAAGATTTACTTACCCACATTTGCAATGGCCTCGTATAAGTTAAATGGATCTATTTGGATGGAAAATGGCCTTAGTGAGAGTCAACTAGCAAATTCCCTCTTGCAGGCTGCAGATAAGTGGTTGAGATTGCTGCATGCGAACCACCCAGATTATCAGTTCTTCATATCACACAGCACATATCACAGTATGGTTGGTTCTGCTGGTGGAGCCAGTGGCAGCAGAAGATATTACAGATATATTTTGTGGAGAAGTGTCGAACGTGAATTCCGTTTACTGCAGAAAATGACTGTCCGGACACCTGGAACACCAGCTTCAAAAATGGATAGGACACCAGCATCGACCCCTGGAGGACCAAGAATTAAGGAGGAGAAGATTGTGGTGACAGTAAGGGTGAGGCCTTTGAACAAAAAGGAGCAATTGGCTAGAGATCAAGTAGCATGGGATTGCATTGACGACCATACGATCGTGCATAAACTAGCAGCACATGAACGATCAGCTCAACCGGCCTCGTTTACTTTTGATAAGGTTTTTGGTCCAGCTTCTTTGACTGAGGCTGTGTACGAGGAAGGAGTAAAGAATGTTGCATTGTCTGCCTTGATGGGCATTAATGCAACTATTTTTGCTTATGGACAAACCAGCAGTGGAAAGACATACACAATGAGGGGAATAACAGAGAAGGCTGTCAATGATATTTATAATCATATAATGAACACCCCAGAGAGAGATTTTACCATAAAAATATCAGGACTAGAAATATACAATGAGAATGTTAGGGACTTGTTAAATTCAGAATCTGGTCGCAACCTGAAGCTGCTAGATGATCCTGAGAAAGGTACTGTGGTTGAAAAGTTGGTGGAAGAAACTGCAAATGATGATAAGCATTTGAGACACCTGATCTCAATCTGTGAAGCTCAAAGGCAGGTTGGTGAAACTGCTCTCAATGATACTAGCTCTCGATCCCACCAAATAATAAGACTGATAATTCAGAGTACTTTGCGTGAAAATTCAGATTGTGTGAGATCGTTTGTTGCAACACTGAACTTTGTTGATCTGGCTGGAAGTGAAAGGGCTGCCCAGACACATGCAGATGGCACTAGGCTTAGAGAAGGTTGCCATATTAACCTTAGCTTGATGACTCTTACAACTGTCATCAGAAAGCTCAGTGTTGGAAAAAGAAGTGGCCATATACCTTACAGAGATTCAAAGCTCACGCGTATATTGCAACACTCCCTTGGTGGGAACGCACGCACTGCCATCATATGTACTTTGAGCCCCGCTCTAAGTCATGTAGAACAATCACGAAACACTCTCTACTTTGCTACCCGTGCAAAGGAAGTAACAAATAGTGCTCAAGTGAACATGGTTGTTTCGGACAAGCAGCTTGTTAAACATTTGCAAAAGGAAGTTGCTAGACTGGAGGCAGAGTTGCGCACTCCGGATCCATCTAAGGAAAAGGATTGGAAAATTCAAGAGATGGAGAGGGAAATCGAAGAACTGAAACGGCAAAGAGACCATGCGCAATCTCAGGTGGATGAGTTACGCAAAAAACTTCAAGAAGATCAGCAGGTCTCAGGCCCACTTGAATCACCCCATCTTTCAGTCAAAAAGTGTCTCTCATTCACCGGGGCACTGTCAGTTCCAGGTGGTGGTGGTGATAGAACAAGGAGCTCAACATTAAAGATGTCCATGAGGCAATCTTCTACTGCTCCTTTTGCCCTCATGCATGAAATCCGCAAACTTGAGCACCTCCAAGAGCAATTAGGTGAAGAAGCTAATCGAGCTTTGGAAGTATTACAAAAGGAAGTAGCATGTCACAGACTGGGTAATCAAGATGCAGCTGAGACTATTGCAAAGCTGCAGGCAGAAATAAGGGACATGCAGACAGCCAAGCCAATGTCTAAGGACGTTGAAGTTGTTGGAAGCATGGTTGCTATTGATAAGAGTGTCAGTGCAAACCTCAAGGAAGAGATTACTAGACTTCATTCCCAGGGAAGCACCATTGCAAATCTTGAGCAGCAGCTTGAGAATGTTCAAAGGTCTATAGACAAGTTGGTGATGTCTCTCCCAAGCAATCATCAACAATTAAGTGATGAAGCAAGCTTAAAGAGCAAAAAGGAACACAAAAGGAAAAAGTTGATTCCTTTGGCTTCAAGTAATGCTGCCAATCGACAAAATTTCTTACGATCTCCCTGCTCACCATTATCAACTACTCAACAAGTTTTGGAATCTGATATTGAAAACAAGGCTCCAGAGAATGATGACAATATTACAAGTGAGATTCTGCCAGATTCAGAAAAGGATACACCATCGAAGAGTGAAGACGGTGGAGATGTTTCATCAAAGGAAAATAATTCAGGTTATCGACGCTCTAGTTCAGTTAACATGAAGAAAATGCAGAAGATGTTTCAGAATGCAGCAGAAGAGAATGTAAGAAGTATAAGAGCATATGTCACAGAATTGAAAGAACGTGTGGCCAAACTGCAATATCAAAAGCAATTACTTGTTTGTCAGGTGCTTGAGCTTGAAGCAAATGAAGCAAATGGCCACAATATAGAAAACGAAGAGAACTTTTGTGAACCAGAAGAACCGCAAGTGTCATGGCAAGTACTATTTAAAGAGCAGCGGCAGCAGATCATTGACTTATGGGACCTGTGCTATGTCTCCATAATTCATAGGACTCAGTTTTACTTGTTATTCAAGGGAGACCCAGCCGATCAAATATACATGGAAGTGGAACTAAGGCGGTTGACGTGGTTGCAACAGCACCTTGCAGAACTTGGCAATGCAAGCCCAGCTCATGTTGGGGATGAGCCTGCCATCTCTCTGTCATCAAGCATCAGGGCCTTGAGACGAGAAAGAGAATTTCTTGCCAAGAGATTGACCTCACGCTTGACTGCGGAGGAGAGGGATGCATTATATATTAAATGGGATGTCCCTCTTGAGGGGAAGCAAAGGAAGATGCAATTTGTGAACAAGCTTTGGACTAATCCCCATGATCCAAAGCATATACACGAGAGTGCTCAAATAGTTGCAAAGCTTGTAGGTTTCTGTGAAGGAGGGAATATGTCAAAAGAGATGTTTGAGCTGAATTTTGTGCTGCCATCTGATAGGAGGCCATGGCTCATGGGCTGGAACAATATAACAAACCTTCTTAACTTGTAA 4212 0.4328 MLGTALQFGGVRGKDRFYIPVKARKSLSQREQAQKAKSGETVSADSTPKAKDVASENKNSSEPSYSSTKPSSCPSLMPACNIDRFLESTRPLVPAQYFSKTTMRGWKTCDVEYQSYFTLNDLWESLKEWSVYGAGVPLVLDQSESVVQYYVPYLSGIQLYSQSAEKSNAKPRYVGEDSDCDSYRDSSSDGSSDFEIGKNTELSAAQRSRQHLTGDVSLRMRGLSVRDKHNAMQEGFSSDDSETGNPQDLLVFEYFEHEPPYSREPLADKIIDLSRHYPGLKSLRSCDLLPSSWMSVAWYPIYRIPTGPTLKDLDACFLTYHSLHTPLTGSGLTQAQTPTLVFPNDMDGEPKIYLPTFAMASYKLNGSIWMENGLSESQLANSLLQAADKWLRLLHANHPDYQFFISHSTYHSMVGSAGGASGSRRYYRYILWRSVEREFRLLQKMTVRTPGTPASKMDRTPASTPGGPRIKEEKIVVTVRVRPLNKKEQLARDQVAWDCIDDHTIVHKLAAHERSAQPASFTFDKVFGPASLTEAVYEEGVKNVALSALMGINATIFAYGQTSSGKTYTMRGITEKAVNDIYNHIMNTPERDFTIKISGLEIYNENVRDLLNSESGRNLKLLDDPEKGTVVEKLVEETANDDKHLRHLISICEAQRQVGETALNDTSSRSHQIIRLIIQSTLRENSDCVRSFVATLNFVDLAGSERAAQTHADGTRLREGCHINLSLMTLTTVIRKLSVGKRSGHIPYRDSKLTRILQHSLGGNARTAIICTLSPALSHVEQSRNTLYFATRAKEVTNSAQVNMVVSDKQLVKHLQKEVARLEAELRTPDPSKEKDWKIQEMEREIEELKRQRDHAQSQVDELRKKLQEDQQVSGPLESPHLSVKKCLSFTGALSVPGGGGDRTRSSTLKMSMRQSSTAPFALMHEIRKLEHLQEQLGEEANRALEVLQKEVACHRLGNQDAAETIAKLQAEIRDMQTAKPMSKDVEVVGSMVAIDKSVSANLKEEITRLHSQGSTIANLEQQLENVQRSIDKLVMSLPSNHQQLSDEASLKSKKEHKRKKLIPLASSNAANRQNFLRSPCSPLSTTQQVLESDIENKAPENDDNITSEILPDSEKDTPSKSEDGGDVSSKENNSGYRRSSSVNMKKMQKMFQNAAEENVRSIRAYVTELKERVAKLQYQKQLLVCQVLELEANEANGHNIENEENFCEPEEPQVSWQVLFKEQRQQIIDLWDLCYVSIIHRTQFYLLFKGDPADQIYMEVELRRLTWLQQHLAELGNASPAHVGDEPAISLSSSIRALRREREFLAKRLTSRLTAEERDALYIKWDVPLEGKQRKMQFVNKLWTNPHDPKHIHESAQIVAKLVGFCEGGNMSKEMFELNFVLPSDRRPWLMGWNNITNLLNL 1403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1793 1403 Pfam Domain of unknown function (DUF3490) 1221 1383 IPR021881 -
Lele05g1793 1403 Coils Coil 832 873 - -
Lele05g1793 1403 Coils Coil 1010 1037 - -
Lele05g1793 1403 MobiDBLite consensus disorder prediction 1129 1144 - -
Lele05g1793 1403 ProSiteProfiles Kinesin motor domain profile. 474 796 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele05g1793 1403 Pfam Kinesin motor domain 480 796 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele05g1793 1403 MobiDBLite consensus disorder prediction 1096 1128 - -
Lele05g1793 1403 MobiDBLite consensus disorder prediction 25 73 - -
Lele05g1793 1403 MobiDBLite consensus disorder prediction 850 878 - -
Lele05g1793 1403 MobiDBLite consensus disorder prediction 1067 1095 - -
Lele05g1793 1403 Gene3D Kinesin motor domain 468 826 IPR036961 -
Lele05g1793 1403 Coils Coil 959 979 - -
Lele05g1793 1403 MobiDBLite consensus disorder prediction 168 196 - -
Lele05g1793 1403 Coils Coil 930 950 - -
Lele05g1793 1403 FunFam Kinesin-like protein 468 827 - -
Lele05g1793 1403 MobiDBLite consensus disorder prediction 1039 1144 - -
Lele05g1793 1403 MobiDBLite consensus disorder prediction 32 50 - -
Lele05g1793 1403 SMART kinesin_4 472 804 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele05g1793 1403 PRINTS Kinesin heavy chain signature 661 678 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele05g1793 1403 PRINTS Kinesin heavy chain signature 746 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele05g1793 1403 PRINTS Kinesin heavy chain signature 551 572 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele05g1793 1403 PRINTS Kinesin heavy chain signature 695 713 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele05g1793 1403 ProSitePatterns Kinesin motor domain signature. 694 705 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lele05g1793 1403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 474 830 IPR027417 -
Lele05g1793 1403 CDD KISc_CENP_E 474 796 - -
Lele05g1793 1403 MobiDBLite consensus disorder prediction 170 188 - -
Lele05g1793 1403 MobiDBLite consensus disorder prediction 57 73 - -
Lele05g1793 1403 PANTHER CENTROMERE PROTEIN E 472 1384 - -
Lele05g1793 1403 Coils Coil 805 825 - -
Lele05g1793 1403 Pfam Protein of unknown function (DUF789) 80 404 IPR008507 -
Lele05g1793 1403 MobiDBLite consensus disorder prediction 850 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1793 Lele-ChrLele05 11949728 11963121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1793 465 877 Miscellaneous Gene Families AT5G06670 39.100 7.77e-81 280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1793 05 11949728 11963121 Lele05g1793 05 11949728 11963121 ECH
Lele05g1793 05 11949728 11963121 Lele07g1859 07 11874576 11878020 hybridization
Lele05g1793 05 11949728 11963121 Lele08g1656 08 11093519 11104665 hybridization