Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1474 ATGAAGGAATTTCCACCTTGCTTTGGGGAAAATGACGTTCAGGTTGCCGAATCGTCCTTCTCAAGCACAAGAGCGTCAGAAAACGTGGCTTCTTCTGTCTATCAATGTGAATCACAAAGCTGTTCCTGCTTCATCACTGTAACATGGACCAAAACTTTCATTGGTGAAGACCTGTGCGTTGCAATGGACAACTCAGGCGATCGAAGCCTCTGTGACATCGAAATACAGCCATGGCTGTTCTCAACAAAAAACGGCTCCCAAACTTTACTGTTCAGCACTCATAAACTCGACCTGTTTTGGGACTTAACCAGTGCTAAACTGGCTTATGGACCAGAGCCATTGGAAGGGTTTTACTTAGGTGTTGTACTCAACCAAGAACTGGTCTTACTCCTGGGTGATCTAAAAAAGGAGGCCAGCAAGAAGATAGAAGATTATGAGCGTCCTCACTTTGAACCTGTTTTAATTTCCAGGAGAGAACACATATATGGCAAGAGATTTTACGGTTCAAAGACTCAATTTCGTGATAAGGGGCAAATACATGAAATAACAATTGAATTTGGCTTTGACACAATTGAAAGAGGGCCTTGTCTTGAGATTCAAGTTGACAGAAAGATAGCTATGGAGGTGAAGCGATTGGACTGGAAGTTTAGAGGCAACAAAACCATTTGGGTGGATGGCTTTCCCGTGGAAGTGATTTGGGATGTTCATGGTTGGCTGTTTGGGGACGATGATAAAGAAGACTATGCACTTTTCATGTTCCAAACTCATTTCTCGTTGCAGAAGATGCGAGCATATCAATCTGATGAGGATTCTCCTGCTGCAACAAAGGCTTATACCCAGCAACTTATGGAGCAAACCCAGATGATGCAAGGTCCTGACTTCACCGTGGTTTTGTACGCTTGGAAGACTGATTAG 915 0.435 MKEFPPCFGENDVQVAESSFSSTRASENVASSVYQCESQSCSCFITVTWTKTFIGEDLCVAMDNSGDRSLCDIEIQPWLFSTKNGSQTLLFSTHKLDLFWDLTSAKLAYGPEPLEGFYLGVVLNQELVLLLGDLKKEASKKIEDYERPHFEPVLISRREHIYGKRFYGSKTQFRDKGQIHEITIEFGFDTIERGPCLEIQVDRKIAMEVKRLDWKFRGNKTIWVDGFPVEVIWDVHGWLFGDDDKEDYALFMFQTHFSLQKMRAYQSDEDSPAATKAYTQQLMEQTQMMQGPDFTVVLYAWKTD 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1474 304 PANTHER EXPRESSED PROTEIN 4 302 IPR008586 -
Lele05g1474 304 Pfam Plant protein of unknown function (DUF868) 27 302 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1474 Lele-ChrLele05 9447787 9448701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1474 1 304 EF-hand Containing Proteins AT3G04860 44.444 3.03e-90 269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1474 05 9447787 9448701 Lele05g1474 05 9447787 9448701 ECH
Lele05g1474 05 9447787 9448701 Lele07g1534 07 9439231 9440145 hybridization
Lele05g1474 05 9447787 9448701 Lele08g1325 08 8449586 8450497 hybridization