Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1194 ATGACTTCCCAAGGCATTCTATTGGGAATGGGTAATCCCCTCCTTGACATCTCATCCGTCGTCGACCCTGACTTCTTGCAAAAATACGACCTCAAGTTGAACGATGCAATTCCTGCAGACGAAAAGCACCAGCCTATGTTCGAAGAAATGGCCACAAAATATAACGTGGAGTACATAGCCGGAGGTTCTACTCAGAATTCAATCAGGGTTGCACAGTGGATGCTTCAAACGCCAGGTTTAACGACTTACATGGGTTGCATTGGAAAGGATAAATTTGGAGAGGAGATGACGAAGAGTTCAAAAGATGCAGGCGTAAATGTTCAATATCATATAGATGAAACCATACCTACTGGAACTTGTGCTGTTTGCGTAGTTGGTGGTGAAAGGTCTCTTGTTGCCAATTTAGCGGCTGCAAATTGCTACAAGTCTGAACATTTGAAGAGACCAGAAATTTGGGCTTTGGTTGAGAAGGCCAAGTATTTCTATATTGCTGGCTTCTTCCTCGTTGTCTCCCCAGATTCCATTCAATTAGTTGCTGAACATGCAGCTGTAAATAATAAGGTCTTCATGATGAACCTCTCTGCACCGTTCATCTGTGAGTTCCTCAAGGAAGCACTAGATAAAGTTTTGCCGTATATAGACTTCGTTTTCGGAAACGAGACTGAGGCAAGGTCATTTTCTAAAGTGCAAGGCTGGGGGACTGATGATGTGGAGGAGATAGCACTGAAGATTTCCCAGATACCAAAGGCATCAGGAACACACAAAAGGATCACTGTTGTCACACAAGGAGCAGATCCTGTGTGTATTGCAGAGGACGGGAAGGTGAAAAAGTTCCCTGTGATACCATTACCTAAAGAGAAACTTGTTGATACGAACGGAGCAGGAGATGCATTTGTTGGAGGATTCCTTTCACAACTGATTCAGGAGAAGACCATAGAAGAATGTACCAGAGCTGGATGTTACGCAGCAAGCATTATCATGCAAAGGTCTGGGTGTAAGTTCCCAGAGAAGCCTGATTTTAATTGA 1026 0.4376 MTSQGILLGMGNPLLDISSVVDPDFLQKYDLKLNDAIPADEKHQPMFEEMATKYNVEYIAGGSTQNSIRVAQWMLQTPGLTTYMGCIGKDKFGEEMTKSSKDAGVNVQYHIDETIPTGTCAVCVVGGERSLVANLAAANCYKSEHLKRPEIWALVEKAKYFYIAGFFLVVSPDSIQLVAEHAAVNNKVFMMNLSAPFICEFLKEALDKVLPYIDFVFGNETEARSFSKVQGWGTDDVEEIALKISQIPKASGTHKRITVVTQGADPVCIAEDGKVKKFPVIPLPKEKLVDTNGAGDAFVGGFLSQLIQEKTIEECTRAGCYAASIIMQRSGCKFPEKPDFN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1194 341 SUPERFAMILY Ribokinase-like 8 332 IPR029056 -
Lele05g1194 341 CDD adenosine_kinase 5 335 - -
Lele05g1194 341 Pfam pfkB family carbohydrate kinase 27 335 IPR011611 -
Lele05g1194 341 PRINTS Adenosine kinase signature 152 178 IPR001805 GO:0004001|GO:0006166
Lele05g1194 341 PRINTS Adenosine kinase signature 114 129 IPR001805 GO:0004001|GO:0006166
Lele05g1194 341 PRINTS Adenosine kinase signature 261 280 IPR001805 GO:0004001|GO:0006166
Lele05g1194 341 PRINTS Adenosine kinase signature 66 75 IPR001805 GO:0004001|GO:0006166
Lele05g1194 341 PRINTS Adenosine kinase signature 83 97 IPR001805 GO:0004001|GO:0006166
Lele05g1194 341 PANTHER ADENOSINE KINASE 2 341 IPR001805 GO:0004001|GO:0006166
Lele05g1194 341 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 290 303 IPR002173 GO:0016773
Lele05g1194 341 Gene3D - 8 326 IPR029056 -
Lele05g1194 341 FunFam Adenosine kinase 2 54 327 - -
Lele05g1194 341 Gene3D - 15 134 - -
Lele05g1194 341 FunFam Adenosine kinase a 15 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1194 Lele-ChrLele05 7489521 7492408 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1194 05 7489521 7492408 Lele05g1194 05 7489521 7492408 ECH
Lele05g1194 05 7489521 7492408 Lele07g1240 07 7508005 7513051 hybridization
Lele05g1194 05 7489521 7492408 Lele08g1045 08 6630493 6634579 hybridization