Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0886 ATGGTAGGAGGTACGGAGGAGTTACTATGGCAATCGGAAGCAGAATCTATCACCTCCCTGAGGCTAGCGCGTGCCATGAGTGCTCTTCTCTGTGCTCGACCCAAGAAGCTCCAGGACGCTATTCTCCGTCTCTCTTCACTGACCCAAAGACCCTCAATCGGTTCTTTGGAGGACTCGCTATGGTTCTTGCACAAGTATATAAGCGATGCTGCTGAGAAGGAGTATTCATTCGACCAAGTTCTCGTACCCATGATCGAAAATTCATTGAAGTCCAAAGACTCTAGGCATGGTGGCCAAGCCATGATACTGATAAACAGGCTCTTTCAAGATGAGTTGCTTTTCGAACCTTTGACGAAAGGTCTTGCTAACATCATTACAAGGAAGAATGATCGTTTCTTATTGTATGGATGGTGTGTACTTGTGCGAGCTCTTATGGACTATGATAATATTATCAGCGATTCTCCTTTTAGCGGGATAAGGGAGAGGTACAATGGTTTAATAAAGATACTCTCCACCTGCCTGCCACATCTGGCCGGTATTGTTTCTCATGAAAGCACCTTTCAGGATGGGTTTGAGTTACCATCTCGTCTTGGAGTGTCTGCAGCTGATTGTTTTTTGAACCTCACAGAAGCATTAACCAAAATGGCTGAGTCTCAACGTAACAAGTTGAAATCAGATGCAAGAGCAACAAGTCAGCCAATTACTCTAGTTCCATCCAGTAGTGACAAGAAAGTGAAATTAGCTTCTAAATCTTCGACAATGTCTGATACTGGAAGGGGATATATTTTGTGGCATCATTTGGATGCGATAATTTGTTTGGTGCAGAGACTTCTTGCTTGGAGCCAAAAAAGCCGATTTTTACATGCCAAAGGGTTGGAGCAAGTGCTTAAATGGTTGGAAGAGATAAAAAATCACTACTGTTCCTTACAATATGAGGCAGATTCTAATGTTCTCAAGACCGGAGATTTGCTACTCTCTTCTTGCTGGAAGCACTATAGCAGGCTATTGTACTTGGAAGATCAGAAATTTCCGCAACATTACAAGGAGCTTTTAGATCAGTATCTGTCTGGGATTCAGTATTATATGGACAACCATTCTAGTGGGCTTGCTGACAAGAAAGATAGTGAAGTGGAGACCAGAAGGTTTTTCTTGAATTGTTTATGCCTACTATTGGGACGTCTAGATAGCAAGAAACTTGAAAGCACAGTATTAGAATGTGGGATGGATATATCACGGATTCTTGTACCACAGCTAACTTGTACTAATGAAGACATTATCGATGTGGCGGTTGCAATATTCAAGGCTATCATTTTGAAGCCAAATCAGTCAACTCGAAGCACAAATATTAACAGTAGACAAGTGGATGCTGTAGTGCCTTTTCTGCTCCACCTTCTAGATGAGCAGGGAGGTACAGCAAGAGCTGTAGTTAAGCTGATAGCAGAATACTGCTCAATGAGCAAAGATGATAAGTGCCTTAAAGAAGTTTTAAAGCGTCTTTCATCCGGAAATGTTTCACAGAGAAGAAATGCTATTGATGTTATATCAGAAGTGGTTGACATAGCAACAGATTCACAGAAGTCTTCTCTACTCTCTGCTTGGCAAGATGTAGCCAACAACTTACTGGAGCGGCTTGGAGATGAAGACATTGGGATTCAGGAGCAGGCTTCCAAATTACTTCCAGCTTTAGACCCTTCATTGCACTTGCCTACATTAGTCAGTCTTGTTTATTCTCCAATTGAGAGGGTGCAATCATGTGCTACTGATGCCCTTGTTAGGGTCCTCAAATTTCATAGCCAGAAAAACGATGTCCTATTTTTTATGCTAGACTGCCTTAGCAACATCAACCAAAGCGTAGATCTTCCAGAGGTAGCAGAAAAGAAAGGATCAAAGTTGGACACTGACCGTGTACTCAAGCTGACTCCAGAGTGGTCTAAAAGTGTTCAAGACTGGAACTTCTTGATTGGACCGTTGATAGACAAGATGTTTGCAGATCCATCAAATGCAATTATTGTCAGATTCTTGAGTTATATAAGTGAACATCTGTCTGATGCTTCTGATTTAGTCTTGCATCAGGTTCTGCTGCATGTGAGGGGACAGAAGGAAATTGATGAAAGTTTCTTATCAAGATGGGAGAATAGAACCTATACCAATGATGAGTTTGTAGAAATGCAGCAATCTTTATTTGAGCACCTTTCCCCATTGCTTATCATTAAGATGCTTCCACTGAAGGCTTTTAATGACCACCATTCATCAGTTATGTATGGGAATTTCCGTCAAGACATAATGCCTGGCACCAGGGACATTGAAGTTGGTTATGAGTGTATTGCTGCTCTCCTTCTAAGCAGGGCATTTTGTGACGTTGAGTTTGAAGATGTTCGGAAGCTTGCTGCTGAGCTTTGTGGGCGCATTCATCCCCAAGTATTATTCCCAGTTCTCTGCCCCAAGTTAGAGCAGGCTGTTGATACTAAGAATATACTGAAGATAAAGGCTTGTTTACTTTCAATCTGCACATCACTTGTGGTCAGAGGCTGGGAGTCTTTTTCTCATCCTGCTATGTTCACTATTAGAAAGATGATTGAAACAGTGTTGTTGTGGCCAAGTCTTGATGCTGATTCAGTTTCGAAAGCACAACATGGATGCATTGATTGTCTAGCACTGATGTTATGTGCTGAACTACAAGCTGAGGAATCAATTACAAACTGTGCCTCAGATTCTGCATCAGGGATTTCCGTTGTCACTTATGTGATCGGTCATCTCATACATGACGACAAGTATCTTAATCCAGCTTCTGAGTTAGATAGTAGCAACTGTGCACTTGCATCTGCTGTTCCTCTCCCTTTTCGTCTGTGCATGGCTAATGTTCTTATCAGTGCTTGTCAGAAGATCCCAAAATCTTGCACCAATCAATTTGCAGCACGTGTTCTTCCATCCCTCCTTCATTCTCTTGAGTCTGAAATGAAGTCTGAGCTTAGAGCAGCGTGCATCCAGGTCCTCTTTTCTGCAGTCTATCATCTACGATCTGCAGTTCTTCCTTACACATCTAAGCTTTTCAAAGCCTCACTGAGAGTGCTCAGAAACGAGTCAGAGAAGGAAAGGATGGTAGGTGCGAGGCTAATGGCATCTCTTATGGCGAGTGAAGATGTAATTTTGGAAAGCATATCTGGGGGACTATTAGAAGCAAGGTCTGTACTCTTAACGTTATCGTTATCAGATCCTTCACCTGAGATACGACAGCTATGCAGAAAGTTGTTGGCATGTACATCTTCCTAA 3270 0.422 MVGGTEELLWQSEAESITSLRLARAMSALLCARPKKLQDAILRLSSLTQRPSIGSLEDSLWFLHKYISDAAEKEYSFDQVLVPMIENSLKSKDSRHGGQAMILINRLFQDELLFEPLTKGLANIITRKNDRFLLYGWCVLVRALMDYDNIISDSPFSGIRERYNGLIKILSTCLPHLAGIVSHESTFQDGFELPSRLGVSAADCFLNLTEALTKMAESQRNKLKSDARATSQPITLVPSSSDKKVKLASKSSTMSDTGRGYILWHHLDAIICLVQRLLAWSQKSRFLHAKGLEQVLKWLEEIKNHYCSLQYEADSNVLKTGDLLLSSCWKHYSRLLYLEDQKFPQHYKELLDQYLSGIQYYMDNHSSGLADKKDSEVETRRFFLNCLCLLLGRLDSKKLESTVLECGMDISRILVPQLTCTNEDIIDVAVAIFKAIILKPNQSTRSTNINSRQVDAVVPFLLHLLDEQGGTARAVVKLIAEYCSMSKDDKCLKEVLKRLSSGNVSQRRNAIDVISEVVDIATDSQKSSLLSAWQDVANNLLERLGDEDIGIQEQASKLLPALDPSLHLPTLVSLVYSPIERVQSCATDALVRVLKFHSQKNDVLFFMLDCLSNINQSVDLPEVAEKKGSKLDTDRVLKLTPEWSKSVQDWNFLIGPLIDKMFADPSNAIIVRFLSYISEHLSDASDLVLHQVLLHVRGQKEIDESFLSRWENRTYTNDEFVEMQQSLFEHLSPLLIIKMLPLKAFNDHHSSVMYGNFRQDIMPGTRDIEVGYECIAALLLSRAFCDVEFEDVRKLAAELCGRIHPQVLFPVLCPKLEQAVDTKNILKIKACLLSICTSLVVRGWESFSHPAMFTIRKMIETVLLWPSLDADSVSKAQHGCIDCLALMLCAELQAEESITNCASDSASGISVVTYVIGHLIHDDKYLNPASELDSSNCALASAVPLPFRLCMANVLISACQKIPKSCTNQFAARVLPSLLHSLESEMKSELRAACIQVLFSAVYHLRSAVLPYTSKLFKASLRVLRNESEKERMVGARLMASLMASEDVILESISGGLLEARSVLLTLSLSDPSPEIRQLCRKLLACTSS 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0886 1089 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 1088 - -
Lele05g0886 1089 Gene3D - 773 1087 IPR011989 -
Lele05g0886 1089 SUPERFAMILY ARM repeat 26 521 IPR016024 -
Lele05g0886 1089 SUPERFAMILY ARM repeat 440 1085 IPR016024 -
Lele05g0886 1089 Gene3D - 413 615 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0886 Lele-ChrLele05 5442632 5455562 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0886 05 5442632 5455562 Lele05g0886 05 5442632 5455562 ECH
Lele05g0886 05 5442632 5455562 Lele07g0925 07 5512845 5526770 hybridization
Lele05g0886 05 5442632 5455562 Lele08g0742 08 4623036 4628387 hybridization