Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0864 ATGGCTTCTCTGTTATCTTCCACTTCCACTTTACCCAGCTCTAAAGCTGACCAGCTTTCTTCTCTTGTCCGAAAACATTTCTTTCTCCATTCTTTTCTTCCCAAAAGAGCCAATTTTGTCAATTCAAAGAACCCCATGAGAGTGAAATGTGCCGCAATTGGCAACGGCCTGTTCACCCAAACATCCCCAGAAGTTCGTAGGATAGTTCCAGTGAAAGACATGAACCTTCCAAAGGTTAAACTTGTATATGTTGTCCTCGAAGCTCAGTACCAATCATCTCTATCGGCTGCCGTGCAAGCTCTCAATGGTGACAAAGAATATGCTTCATTTGAAGTCGTGGGTTACTTGGTCGAGGAACTTCGCGATGAATCGACGTACAAAACATTCTGTAAGGATCTCGAAGACGCTAATATTTTTATTGGGTCTTTGATTTTTATCGAGGAGCTTGCTCTCAAAGTTAAGGCTGCGGTGGAGAAAGAAAGGGAGAGACTGGACGCTGTTTTGGTTTTCCCATCAATGCCTGAAGTAATGAGGCTGAACAAGTTGGGTTCTTTTAGCATGTCGCAGCTTGGGCAATCCAAAAGTCCGTTTTTCCAGCTTTTCAAGAGAAAGAAGCAGCAATCAGCTGGGTTCGCTGATAGCATGTTGAAGCTCGTAAGGACTTTGCCTAAGGTTTTGAAGTATCTTCCAAGTGATAAAGCTCAGGATGCAAGGCTTTACATACTGAGTCTGCAGTTTTGGCTTGGTGGATCGCCTGATAACCTGCAGAATTTCTTGAAGATGATATCTGGGTCTTATGTTCCAGCATTGAAGGGGACAAAGATCGACTATTCAGAGCCAGTTCTGTACTTGGATAGTGGAATATGGCACCCTTTGGCTCCTTGCATGTATGATGATGTGAAGGAGTATTTGAATTGGCATGCAACTAGAAAGGATGCTAACGAGAAGCTCAAGAGTCCAGATGCACCTGTAATTGGTTTGATTTTGCAGAGGAGTCACATTGTAACTGGGGATGAAGGCCACTATGTGGCTGTGATCATGGAACTCGAAGCAAGAGGTGCCCAAGTTATTCCAATTTTTGCTGGTGGGCTTGATTTTTCAGGGCCCGTGGAGAAATATTTGATCAATCCGATCACCAAGAAACCATTTGTAAATTCAGTAGTATCACTTACCGGCTTCGCTCTTGTCGGAGGCCCTGCAAGGCAGGATCATCCAAGAGCAGTTGAGGCTTTGAGGAGGCTTGATGTACCGTACATTGTTGCATTGCCACTAGTGTTTCAGACCACAGAGGAGTGGCTCAACAGTACATTGGGTTTGCACCCAATTCAGGTCGCTCTGCAAGTTGCTCTGCCTGAGCTCGATGGAGGCATGGAGCCCATTGTATTTGCTGGTCGTGATCCTAGGACAGGAAAATCCCATGCTCTTCATAAGAGGGTGGAACAGCTCTGCACTAGAGCAATCAGATGGGCTGAATTGAAAAGAAAATCAAAGGCAGAGAAGAAATTAGCCATCACTGTTTTCAGTTTCCCTCCAGACAAAGGAAATGTAGGAACTGCTGCATACCTCAATGTTTTCTCCTCCATCTTCTCTGTTCTAAAAGATCTGAAAAGAGATGGTTACAATGTCGAGGGCCTTCCAGAGACCTCCGAAGCTTTAATTGAAGATGTCATACATGACAAAGAGGCACAATTCAGCAGCCCAAATCTGAATGTTGCTTACAAAATGAATGTTCGTGAATACCAAAAGTTGACTCCCTATGCCTCATTATTAGAAGAGAATTGGGGAAAACCTCCTGGGAATTTGAATGCAGACGGAGAGAATCTATTGGTGTATGGGAAACAGTATGGTAATGTCTTCATAGGGGTTCAGCCCACATTTGGCTATGAAGGCGATCCTATGCGGCTGCTTTTCTCCAAATCTGCCAGCCCGCATCATGGGTTTGCGGCTTATTACTCTTTTGTTGAAAAGATTTTCAAAGCTGATGCTGTTCTTCATTTTGGAACACATGGTTCACTCGAATTCATGCCTGGAAAACAGGTGGGGATGAGTGATGTGTGTTACCCAGACAGTCTGATTGGAAATATTCCCAATGTCTACTACTATGCTGCAAACAATCCTTCTGAAGCCACCATAGCCAAGCGCAGAAGCTATGCAAATACCATTAGCTATCTGACTCCTCCAGCAGAAAATGCTGGACTTTACAAAGGTCTTAAGCAGTTGAGTGAGCTCATCTCTTCCTACCAGTCCCTTAAGGACACTGGCCGGGGACCACAAATTGTGAGTTCAATTGTCAGCACAGCTAGACAATGCAATCTTGACAAGGATGTGGAACTTCCAGAGGAGGGCGAGGAGATCCCAGTGAAAGAACGAGATCTCGTGGTCGGTAAGGTGTATTCCAAGATCATGGAGATCGAGTCCCGCTTATTGCCTTGTGGGCTTCATGTCATTGGTGAGCCTCCCTCAGCCTTGGAAGCTGTTGCTACACTGGTGAACATCGCTGCACTTGATCGTCCTGAAGATGGTATCGCTTCACTCCCAGGAATACTAGCCGAGACTGTAGGGAGAGAAATTGAGGGTGTTTACAGAGGGAATGACAAAGGAATATTGAAGGATGTGGAGCTTCTTCGACAAATAACTGAAGCATCACGTGGAGCTATCACAGCCTTTGTGGAGCAAACTACTAATGAGAAGGGTCAAGTTGTTGATGTAGCTGATAAGCTCGGTTCAATTCTTGGCTTCGGAATAAATGAGCCATGGATTCAGTACTTGTCAAACACTAAATTTTACCGTGCAGATAGGGAAAAGCTAAGAGTATTGTTTGCTTTCTTGGGAGAATGTTTGAAGTTGGTTGTGGCTGACAATGAATTAGGTAGTTTAAAACAGGCCTTGGAGGGTAAATATGTGGAGCCTGGTCCAGGTGGTGACCCCATTAGGAACCCAAAAGTTTTGCCAACAGGAAAGAATATCCATGCCCTTGACCCACAAGCTATTCCTACAACAGCAGCTATGCAAAGTGCCAAAATAGTGGTAGATAGGTTGATTGAGAGGCAAAAAGCTGATAACGGAGGAAAGTATCCTGAGACAATTGCACTTGTATTGTGGGGAACGGATAATATCAAGACTTATGGTGAATCCCTGGCTCAGGTCTTGTGGATGATCGGTGTGAGACCAGTGGCTGATACGTTTGGACGGGTCAACCGGGTGGAACCAGTTAGTCTTGAAGAGCTTGGAAGGCCAAGGATTGATGTTGTTGTTAATTGCTCTGGAGTGTTCAGAGATCTTTTCATCAATCAGATGAATCTCCTGGATAGAGCTGTGAAAATGGTTGCTGAATTAGATGAGCCAGCAGAGGAAAACTACGTGAGGAAGCACGCATTAGAACAAGCTCAAGCCCTAGGAATCGAAGTTCGAGAAGCAGCAACAAGGGTCTTCTCCAATGCCTCGGGATCCTACTCCTCCAATATAAACCTGGCCGTGGAGAACTCTTCCTGGAATGATGAGAAGCAGCTTCAGGACATGTACCTTAGCCGCAAATCTTTCGCTTTTGACTGTGATGCTCCTGGTTCAGGCATGACTGAAAAAAGAAAGGTCTTTGAGATGGCTCTGAGCACAGCTGAGGCCACATTCCAAAACCTCGATTCATCTGAAATTTCCCTCACCGACGTGAGTCACTACTTCGATTCAGACCCTACTAATCTGGTTCAAGGTCTAAGGAAAGATGGGAAGAAGCCAAGTGCGTACATTGCCGACACAACCACAGCCAATGCACAGGTCCGTACACTTTCTGAGACTGTGCGACTTGATGCACGAACCAAACTACTGAACCCCAAGTGGTATGAAGGAATGTTGTCTAGTGGCTATGAGGGTGTTCGTGAAATTGAGAAGAGACTCACGAACACTGTAGGATGGAGTGCAACTTCAGGCCAAGTTGACAATTGGGTCTATGAAGAAGCCAACACTACGTTCATTCAAGATGAGGAAATGCTGAACAAGCTCATGAACACAAACCCTAACTCCTTTAGGAAGTTGGTTCAGACGTTCTTGGAAGCCAATGGACGTGGCTATTGGGAAACTTCTGAACAGAATATTGAGAAGCTCAGGCAATTGTATTCTGAAGTGGAAGACAAAATCGAAGGGATTGACCGTTGA 4149 0.451 MASLLSSTSTLPSSKADQLSSLVRKHFFLHSFLPKRANFVNSKNPMRVKCAAIGNGLFTQTSPEVRRIVPVKDMNLPKVKLVYVVLEAQYQSSLSAAVQALNGDKEYASFEVVGYLVEELRDESTYKTFCKDLEDANIFIGSLIFIEELALKVKAAVEKERERLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKRKKQQSAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMISGSYVPALKGTKIDYSEPVLYLDSGIWHPLAPCMYDDVKEYLNWHATRKDANEKLKSPDAPVIGLILQRSHIVTGDEGHYVAVIMELEARGAQVIPIFAGGLDFSGPVEKYLINPITKKPFVNSVVSLTGFALVGGPARQDHPRAVEALRRLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPRTGKSHALHKRVEQLCTRAIRWAELKRKSKAEKKLAITVFSFPPDKGNVGTAAYLNVFSSIFSVLKDLKRDGYNVEGLPETSEALIEDVIHDKEAQFSSPNLNVAYKMNVREYQKLTPYASLLEENWGKPPGNLNADGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIVSTARQCNLDKDVELPEEGEEIPVKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDGIASLPGILAETVGREIEGVYRGNDKGILKDVELLRQITEASRGAITAFVEQTTNEKGQVVDVADKLGSILGFGINEPWIQYLSNTKFYRADREKLRVLFAFLGECLKLVVADNELGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKIVVDRLIERQKADNGGKYPETIALVLWGTDNIKTYGESLAQVLWMIGVRPVADTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPAEENYVRKHALEQAQALGIEVREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGSGMTEKRKVFEMALSTAEATFQNLDSSEISLTDVSHYFDSDPTNLVQGLRKDGKKPSAYIADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMLSSGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANTTFIQDEEMLNKLMNTNPNSFRKLVQTFLEANGRGYWETSEQNIEKLRQLYSEVEDKIEGIDR 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0864 1382 TIGRFAM BchH: magnesium chelatase, H subunit 80 1380 IPR011771 GO:0015995|GO:0016851
Lele05g0864 1382 CDD CobN_like 155 1253 IPR003672 GO:0009058
Lele05g0864 1382 Coils Coil 1356 1382 - -
Lele05g0864 1382 Pfam CobN/Magnesium Chelatase 245 1362 IPR003672 GO:0009058
Lele05g0864 1382 Pfam Domain of unknown function (DUF3479) 80 241 IPR022571 GO:0016851
Lele05g0864 1382 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 23 1381 IPR003672 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0864 Lele-ChrLele05 5289444 5294669 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0864 05 5289444 5294669 Lele05g0864 05 5289444 5294669 ECH
Lele05g0864 05 5289444 5294669 Lele07g0905 07 5360949 5366177 hybridization
Lele05g0864 05 5289444 5294669 Lele08g0718 08 4452553 4457609 hybridization