Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0854 ATGGGTGGGTTGAAGGGACTTCTAAAGAAAGGGTTGGGAGAGATGAGCTTCATGGCCGACGGCGGAGCTATCAACTGGTTCCCGGGACACATGGCAGCCGCCACTCACGCTATTCGCCAGCGCCTCAAGGTTGCTGACTTAGTCATTGAAGTTCGAGACGCGCGTATTCCTTTGTCCTCTGCTCACGCCGATCTTCAATCTCAGCTGTCTGGGAAGCGCCGTGTCATTGCCCTTAATAAAAAAGACTTGGCTAACCCTAATATCATGCATAAATGGATCCATTACTTTGACTCGTGCAAGCAAGATTGTGTTCCTATAAGTGCCCATAGCAAGAGCTCTGTTAAGAAGATTCTTGATCTTGTTGAGTTCAAATTGAAGGAAGTGATTTCCAGGGAACCTACTCTCCTTGTTATGGTGGTTGGTGCTCCAAATGTTGGGAAGTCAGCTTTAATTAATTCAATTCATCAAATTGCATTATCTCGTTTTCCTGTGCAGGAGAAGATGAAGAGAGCTACTGTGGGTCCCCTGCCTGGTGTTACTCAAGATATTGCTGGATACAAGATAGCACACCATCCGAGCATTTATGTCTTAGATACTCCTGGGGTCCTCGTTCCAAGTATCCCAGACATAGAAACAGGGTTGAAGCTGGCTCTTGCAGGATCCGTGAAAGATTCAGTAGTGGGTGAGGAGCGTATTGCTCAATACCTACTGGCAGTTCTGAATACTCGAGGGACTCCAATTCACTGGAAGCACCTGAATAATAGGAGAATCGAGGGGATTCGATATGAATCTGAGGAAAAGCATGAATACAATTTGAAAAGCCTCAAGCGAAAGAGAATAAGTCCGCCGAACAAATCTGAAGTGGTTTATATTGAGGATCTTGTAATGGAAGTTCAACGAGCACTGTATGTGACGCTAACGGAATTCGAAGGGAATGTAGAAGATGAGGGTGACTTGGAGGATCTGATAGAGAAGCAATTTGGGGCATTGCAGAAGGCGTTGAAGATACCACACAAGGCTTCAGAAGCACGTTTAATGGTATCAAAGAAGTTCCTTACTCTGTTTAGGACTGGTAAACTTGGACCTTTCATTCTTGATGATGTTCCTCGTGGTTAG 1116 0.4525 MGGLKGLLKKGLGEMSFMADGGAINWFPGHMAAATHAIRQRLKVADLVIEVRDARIPLSSAHADLQSQLSGKRRVIALNKKDLANPNIMHKWIHYFDSCKQDCVPISAHSKSSVKKILDLVEFKLKEVISREPTLLVMVVGAPNVGKSALINSIHQIALSRFPVQEKMKRATVGPLPGVTQDIAGYKIAHHPSIYVLDTPGVLVPSIPDIETGLKLALAGSVKDSVVGEERIAQYLLAVLNTRGTPIHWKHLNNRRIEGIRYESEEKHEYNLKSLKRKRISPPNKSEVVYIEDLVMEVQRALYVTLTEFEGNVEDEGDLEDLIEKQFGALQKALKIPHKASEARLMVSKKFLTLFRTGKLGPFILDDVPRG 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0854 371 FunFam Mitochondrial GTPase 1 24 203 - -
Lele05g0854 371 Gene3D - 24 203 IPR027417 -
Lele05g0854 371 Gene3D - 208 359 IPR023179 -
Lele05g0854 371 Pfam 50S ribosome-binding GTPase 137 250 IPR006073 GO:0005525
Lele05g0854 371 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 34 205 IPR030378 GO:0005525
Lele05g0854 371 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 16 370 - -
Lele05g0854 371 CDD YlqF 26 203 - -
Lele05g0854 371 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 217 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0854 Lele-ChrLele05 5212781 5215638 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0854 05 5212781 5215638 Lele05g0854 05 5212781 5215638 ECH
Lele05g0854 05 5212781 5215638 Lele07g0893 07 5289859 5292751 hybridization
Lele05g0854 05 5212781 5215638 Lele08g0706 08 4332258 4335286 hybridization