Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0810 ATGGAGATTGCTCCTATTCCGGTGGATAAGTACAATGTAGGTTTTATCGGAGCAGGGAAGATGGCTGAGAGTATAGCCAGAGGCGCCGTCCGATCTGGCGTCTTACCCCCTTCTCGGATTCGCACTGCTGCTCACTCCAATCCTGCTCGCCGCGCCGCCTTCGAGTCCTTCGGCGTCAATGTTCTCTCCCGCAATCAAGACGTTGTTGAAGACAGTGATGTTGTCATTTTTTCTGTGAAACCTCAAGTAGTGAAAGAAGTGATATTGCAGTTAGGGCCACTTCTTACAACTAAGAAGCTTCTGGTTTCGGTTGCTGCTGGGGTGAAATTGAAAGATCTCCAGGACTGGGCCGGACACAGTCGATTTATAAGGGTAATGCCTAATACTCCTGCTGCTGTAGGCGAGGCAGCATCAGTTATGAGCTTGGGAGGAGCTGCAACAGAAGAAGATGGAAACCTTATTTCCAACTTATTTGGATCAGTTGGCAAAATATGGAGAGCTGATGAGAAGTATTTTGATGCAATAACTGGCCTGAGTGGCAGTGGTCCAGCTTATATTTATTTAGCTATAGAGGCTTTAGCAGATGGTGCAGTAGCTGCAGGTCTTCCAAGAGACCTTGCCTTGAGTCTAGCTTCTCAAACTGTATTAGGAGCAGCATCGATGGCGACTAGTACTGGGAAGCATCCAGGTCAGCTCAAAGATGATGTTACATCTCCTGGTGGGACAACAATTACTGGAATTCATGAGTTGGAGAAAGGTGGGTTTCGTGGAACACTGATGAATGCTGTTGTTGCTGCTGCTAAACGTAGCCGAGAGCTTTCCTAA 825 0.4752 MEIAPIPVDKYNVGFIGAGKMAESIARGAVRSGVLPPSRIRTAAHSNPARRAAFESFGVNVLSRNQDVVEDSDVVIFSVKPQVVKEVILQLGPLLTTKKLLVSVAAGVKLKDLQDWAGHSRFIRVMPNTPAAVGEAASVMSLGGAATEEDGNLISNLFGSVGKIWRADEKYFDAITGLSGSGPAYIYLAIEALADGAVAAGLPRDLALSLASQTVLGAASMATSTGKHPGQLKDDVTSPGGTTITGIHELEKGGFRGTLMNAVVAAAKRSRELS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0810 274 TIGRFAM proC: pyrroline-5-carboxylate reductase 13 273 IPR000304 GO:0004735|GO:0006561
Lele05g0810 274 Gene3D - 172 274 - -
Lele05g0810 274 Pfam Pyrroline-5-carboxylate reductase dimerisation 169 273 IPR029036 -
Lele05g0810 274 Pfam NADP oxidoreductase coenzyme F420-dependent 13 107 IPR028939 -
Lele05g0810 274 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 168 274 IPR008927 -
Lele05g0810 274 PANTHER PYRROLINE-5-CARBOXYLATE REDUCTASE 10 274 IPR000304 GO:0004735|GO:0006561
Lele05g0810 274 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 165 IPR036291 -
Lele05g0810 274 Hamap Pyrroline-5-carboxylate reductase [proC]. 11 273 IPR000304 GO:0004735|GO:0006561
Lele05g0810 274 ProSitePatterns Delta 1-pyrroline-5-carboxylate reductase signature. 229 251 IPR000304 GO:0004735|GO:0006561
Lele05g0810 274 FunFam Pyrroline-5-carboxylate reductase 6 171 - -
Lele05g0810 274 Gene3D - 1 171 - -
Lele05g0810 274 PIRSF P5CR 10 274 IPR000304 GO:0004735|GO:0006561
Lele05g0810 274 FunFam Pyrroline-5-carboxylate reductase 172 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0810 Lele-ChrLele05 4852599 4855155 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0810 05 4852599 4855155 Lele05g0810 05 4852599 4855155 ECH
Lele05g0810 05 4852599 4855155 Lele07g0849 07 4913703 4916262 hybridization