Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0802 ATGAACGGGGGGCCATCTGGTTTTACTAATGCTCCCATCACAAGGACTTTCATTATCGCCTCAGCTCTTTTTACTATCTTCTCCGGGATCCAAGGTCGTTATAACAGACTGGGATTGTCTTATCAGGACATATTTGGAAAGCTTCGCCTCTGGAAATTGATTGTGTCCATATTTGCTTTTTCATCAACTCCAGAGTTGATGTTTGGACTGTTTCTGCTATACTATTTCAGGGTCTTCGAGAGACAGATAGGTTCCAATAAATACTCAGTCTTTATCACATTCTCCATATTAATATCACTGCTGTTTGAGGTGCTTTCTATATCAATCTTAAAAGATCCTGCAGCAATCTTAGTCACCTCTGGACCTTATGGTCTTATATTTGCTTCATTCGTACCCTTTTTCTTTGACATTCCAGTTTCAACACGGTTTCGTGTAGCTGGTTTCCACTTCTCTGATAAATCATTCATATATCTAGCTGGTCTACAGCTTCTTTTATCATCATGGAAAAGTTCTCTCTTGCCAGGGATGTGTGGCATCCTTGCTGGTTCCGTGTACCGTTTAAATGTCTTCTACATACGCAAAGCCAAGTTCCCAGAGTTCATTGCCTCCTTCTTTTCAAGGATTTCTTTGCCATCCATGGGAAGTCCACCTTCAGCATCAACAAGGAATGTAGTGGGAAATATGACATCCTATCCAACTCGCCAGATGGAGAGGAACTACCCTGCTCCAGTGCAATCTGTGCCACAACCATCGGAGGACTCTATCTCTACACTTGTCTCCATGGGCTTTGATAGGGATTCTGCTAGACAGGCACTAGTGCAGGCTAGGAACGATGTTAATGTGGCTACAAACATCCTGCTGGAGGCACAATCCCACCAATAA 882 0.4297 MNGGPSGFTNAPITRTFIIASALFTIFSGIQGRYNRLGLSYQDIFGKLRLWKLIVSIFAFSSTPELMFGLFLLYYFRVFERQIGSNKYSVFITFSILISLLFEVLSISILKDPAAILVTSGPYGLIFASFVPFFFDIPVSTRFRVAGFHFSDKSFIYLAGLQLLLSSWKSSLLPGMCGILAGSVYRLNVFYIRKAKFPEFIASFFSRISLPSMGSPPSASTRNVVGNMTSYPTRQMERNYPAPVQSVPQPSEDSISTLVSMGFDRDSARQALVQARNDVNVATNILLEAQSHQ 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0802 293 Gene3D - 217 292 - -
Lele05g0802 293 SMART uba_6 251 288 IPR015940 -
Lele05g0802 293 Pfam UBA/TS-N domain 251 286 IPR015940 -
Lele05g0802 293 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 249 289 IPR015940 -
Lele05g0802 293 PANTHER RHOMBOID-RELATED PROTEIN 3 232 - -
Lele05g0802 293 Gene3D - 9 188 IPR035952 -
Lele05g0802 293 SUPERFAMILY UBA-like 244 289 IPR009060 GO:0005515
Lele05g0802 293 SUPERFAMILY Rhomboid-like 11 186 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0802 Lele-ChrLele05 4786467 4789634 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0802 05 4786467 4789634 Lele05g0802 05 4786467 4789634 ECH
Lele05g0802 05 4786467 4789634 Lele08g0647 08 3922219 3925455 hybridization