Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0641 ATGCTGCGAGGTCTCTCCTTCGGATCATTGACGTCGTCTTCAGTTTCTGCTTCTGCGTCTGCTCCGGGCCCTAATCCGCCTCCTCTCCAAGGGCATTCCACAGAGCCGACCCCCGTCACCACCACTCAGTCGTCACCCTCCCCAGATGTGTCTCTCGCATACAGTGGCACCGTACTGGGTAATTCCTTCAAGCAGATCCGATCGATAATTGAGTTAGAAGTATTTGACCCTGACGGAAACGATCCTCCCCAAGACCAACCTCAGCTCGTCGATGGGTCTGCCGACGGAGACTCGCAGAGGAGATTCCTGGAAAAGCTGCTTCAACCTGACCGAGATTCCGTCCGAAAAGGGCTCGCACAACTCAAGTCCAATTCTCTCACTCACCTTGCCTCTACGTGCTTCGACCATAGCGAAGCCGCTTTTGACCTCTGCCTTGGGCTTCTCCAAAGTCTCAATTGTGCGCGTATCATGTACGCTCCTCTTCTTGTCCTTTTCTCTGTTCTTCCCTCCGATTCCAATCACATCACTCAATCCCAGTGTGACGATGCATTCAACGTCTTCATAAGATTCGATACTCATGACAATCCTTTTCCCTCCCGCGATTCACCTGACTTCTGCAACATGCGCACCTCCTTTTCTGAACTTGACCAACAACTTCATCGCTATCTTCGAGTTTCTCACTCCAAATTACGCCTTATCCGCCGTGCCACTACTGGTTCTGCTCTTTGCTTCATTGCTACTGCCGTCGGAGTGGTTGCAGCTGCCGTTGTCATCACGACCCATGCACTTGTCGCCGTTGCTGTTGCTGCAGCTCCCGTTTGCCCTGTATTATCCCATTTTGAGAACACCAAAAAGAAGGAACTTGCTCGATTGGCGCAGCTTGAAGCAGCTCGGAGCACTCTTGCTCTGAAACATCATCTTGATTCAATTGTTAGCCTTGTTGATCTGCTGCACGAAGCAGTTAAAGCCGACAAGAATTCTGTTCGTAATAGTTTGAAGATGGTTAAAGATAGATATGCCATCCAAGGGACCGTCAAGTTGCTGCGCAAGAGGTATGAGAGCCTTCGTGAGCATATGGAGGACCTTAAGACGTATATGGTATTCGACAAAGCCCTCTCCCTTTACCAGCGCTCAGACCTCCCCGCCAGAAATGTGGTGTCCCGCGAATTCCATCGCACTATACAGGCCGATTCCTACCAAGAGCTTCGATCGATAATACAGTTCGAAGTATTTGACCCCGCTGGATCCGATCCTTCGCAAGACAATCCTGAGCTCGTTGATGGGTATGCCGAGGAAGGCTCCCAAAGGAAAATACTGGAAAAGGTGCTTCGACCTGACCGAGATAGTGTCCAAGAAGCTCTTGCACAACCCAAGCCCAATTCTCTGACTCGGCTCGTCTCTACCTACTCTGCCCATTGCGAGACCCCCTCTGAACCCTGCCTCCTACTTCACCAAAGTCTCAATTGTGCGCGTACCATGTACGCTCCTCTTCTTGACCTTCTCCCTGTTCTTCCCTCCGATTCCAATCACATCATTCAATCCCAGTGTGACAATGCATTCGACGTCTTCTCCACATTCGATACACATGACAATCCTTTTCCCTCCCGTGATTCACATAACTTCAGCAACATGCACAACTCCTTTTCTGAACTTGACCGACAACTTCATCGTTCTCTCCGAAATTACGGTGCTACCAATGCCATTGCTGCTGCTGCTCCTGTTCGCCCTGGACGTATCTCTCCTCCTCGGAACCCAAGAAAGAAGGAACTTGCTCGATTGGCACAGCGTGAAGCCGCTTCGAAGGGTACTTATACCCTGAACAAAAATCTTGATACGACTGATCGCCTTGTTGATCGGCTACATGGTGCGGTTGAAGGGGTCTGTTCACCTTGGCTTGGAGATGGGTAA 1908 0.5052 MLRGLSFGSLTSSSVSASASAPGPNPPPLQGHSTEPTPVTTTQSSPSPDVSLAYSGTVLGNSFKQIRSIIELEVFDPDGNDPPQDQPQLVDGSADGDSQRRFLEKLLQPDRDSVRKGLAQLKSNSLTHLASTCFDHSEAAFDLCLGLLQSLNCARIMYAPLLVLFSVLPSDSNHITQSQCDDAFNVFIRFDTHDNPFPSRDSPDFCNMRTSFSELDQQLHRYLRVSHSKLRLIRRATTGSALCFIATAVGVVAAAVVITTHALVAVAVAAAPVCPVLSHFENTKKKELARLAQLEAARSTLALKHHLDSIVSLVDLLHEAVKADKNSVRNSLKMVKDRYAIQGTVKLLRKRYESLREHMEDLKTYMVFDKALSLYQRSDLPARNVVSREFHRTIQADSYQELRSIIQFEVFDPAGSDPSQDNPELVDGYAEEGSQRKILEKVLRPDRDSVQEALAQPKPNSLTRLVSTYSAHCETPSEPCLLLHQSLNCARTMYAPLLDLLPVLPSDSNHIIQSQCDNAFDVFSTFDTHDNPFPSRDSHNFSNMHNSFSELDRQLHRSLRNYGATNAIAAAAPVRPGRISPPRNPRKKELARLAQREAASKGTYTLNKNLDTTDRLVDRLHGAVEGVCSPWLGDG 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0641 635 Coils Coil 277 297 - -
Lele05g0641 635 PANTHER UPF0496 PROTEIN 3-RELATED 384 561 IPR007749 -
Lele05g0641 635 MobiDBLite consensus disorder prediction 1 50 - -
Lele05g0641 635 Coils Coil 345 365 - -
Lele05g0641 635 MobiDBLite consensus disorder prediction 75 95 - -
Lele05g0641 635 MobiDBLite consensus disorder prediction 1 20 - -
Lele05g0641 635 MobiDBLite consensus disorder prediction 34 50 - -
Lele05g0641 635 Pfam Protein of unknown function (DUF677) 122 363 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0641 Lele-ChrLele05 3777143 3780799 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0641 05 3777143 3780799 Lele07g0674 07 3836794 3838129 hybridization
Lele05g0641 05 3777143 3780799 Lele08g0476 08 2907607 2909677 hybridization