Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0622 ATGGCCACATTACCATGTTTCCTTCCTCTCCTCGAAGCTTCGCTTCTCTGTCACTCTGCTTCTCTCCTCTCTGTAACCACCAAAACAATGGGTTGCACTAACTCTGTACACGCACTTGGCAAGAAGAAGAAGAAGACAAGTATCCCTGAAGTGGTGGTTTTTGTTCCCTCCATTCGATTTCCTATACAATCTGATCTTCACAGGGCGCTAAAAGGGCTAGTTCCAACGGATCTTGCTGACAAGTTATCTTCTCTTCGGAATCAGATAATTCTAGTGGCTGAGGATACTGGTGGATCTGCCATAGCAGAATTTCGGGGAGCTCTGAATGAATACTTGTCTGTTCTTGTTGGGCTTACGAAGAAAGAGTATGGTCTTGAGGGATTAATAAAATTCAAGTGGAAAAATTTCCAGGATGGGCGACAAGATAGCTGTGTAGCAAATTCCTGGTTTGAGGTGCTTTCTGCAGTTCATCTTATGGCTATGCTGACATTGTCAGAAGCTAATTCGTTATTGATCGCAAAGGACCATTCAGGATCTGGAATAAGAGTTGTATCTTCAGTGAGTGATCACGTTGTGCTCCCAGATAGCAAGAGAGAAGCAGTGGATTTGTTACTGAAGGCATCAGGATACCTGCAGTTCTGTGTCAGGGAGCTTCTCACTCGAATACCACTTGACATTAAGAAAATGTTGCCCTACGGCTTGCAGGGTGGTGTATTAGAGGCTATATCCATTCAAGCGCTAGGCCAGGGAACAGAGATTCAGCTTGGCCTTGCTGTTGAATGTCAGAACGCAACTTTGTCAGTGAAGAGAAGGTTGGCATGTGAGCAACTGCTTTATTTTAGTCAGGCTTATCAGTGCTTGTTAGGGTGTGGCTTCAACCAAGAGTATGGAAAGAAGCATCTCCGGTTCATCAGATGGAAATTCCTTGAAGCCAAGGCTGCAGCCTACTACTACCAGGGCCTGATTGTTGACAAGGATAATGAACCGAGCAATCACATTGTTGCTGTATCTTGTTTTCTTGCTGCAGAAGAACTTCTAGCTGAGAGCAGGAAGTCCTGTTTAAGCTTCTGTATTGCAGCTCCAGTGACCAGGTCTGCTCCACTCTGGGGGGCCATGAAACATTTACGTCAGAAAATTCCTGAAGTTGCGTCAAGGAAGTCTCAGATGTATGGCTACCTCTCAGAACAAGAGAAGGGTCTCCAAGCATTGCCTGAGCTACCTGATTTTCAATTATCATTGCGTCCAGATGACTACGAGCTGCCTGAAATAGATGCAGTATGGGATAGTGAAAGCTGGGAAAGTTTAGGGCAACCTCTGAAAGAACATCTTAGAGATAGAGAAGATGAAGAAGTTGAAGATGAAATTAATGACGACAGAGACTGTGAAGTGACATGGAAAACTTGA 1404 0.4459 MATLPCFLPLLEASLLCHSASLLSVTTKTMGCTNSVHALGKKKKKTSIPEVVVFVPSIRFPIQSDLHRALKGLVPTDLADKLSSLRNQIILVAEDTGGSAIAEFRGALNEYLSVLVGLTKKEYGLEGLIKFKWKNFQDGRQDSCVANSWFEVLSAVHLMAMLTLSEANSLLIAKDHSGSGIRVVSSVSDHVVLPDSKREAVDLLLKASGYLQFCVRELLTRIPLDIKKMLPYGLQGGVLEAISIQALGQGTEIQLGLAVECQNATLSVKRRLACEQLLYFSQAYQCLLGCGFNQEYGKKHLRFIRWKFLEAKAAAYYYQGLIVDKDNEPSNHIVAVSCFLAAEELLAESRKSCLSFCIAAPVTRSAPLWGAMKHLRQKIPEVASRKSQMYGYLSEQEKGLQALPELPDFQLSLRPDDYELPEIDAVWDSESWESLGQPLKEHLRDREDEEVEDEINDDRDCEVTWKT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0622 467 PANTHER UNCHARACTERIZED 30 434 IPR038898 -
Lele05g0622 467 CDD BRO1_Alix_like 39 416 - -
Lele05g0622 467 Gene3D alix/aip1 like domains 68 436 IPR038499 -
Lele05g0622 467 MobiDBLite consensus disorder prediction 443 467 - -
Lele05g0622 467 SMART BRO1_2 52 423 IPR004328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0622 Lele-ChrLele05 3678835 3681818 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0622 05 3678835 3681818 Lele05g0622 05 3678835 3681818 ECH
Lele05g0622 05 3678835 3681818 Lele07g0653 07 3725496 3727849 hybridization
Lele05g0622 05 3678835 3681818 Lele08g0449 08 2764532 2768230 hybridization