Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0616 ATGCAAGAGATGAGAAACTGCTATGACTGCTTGCTTTCTGCTGCTGCTGCAACAGCCAACAGTGCCAATGGTGCTTGTCTATTGGAGAAAACTCCAGTTAATGATGATGAAGAAAATGATGGAAGTGGTTTGCAGCGTTCTCACATAATAGTCACAATTATAAACCCATCAGAGTCTCTTCTCAATGAGCTGCGGACTGTTGAGGAACATTCCCGAGTCTCGTGCATTTTTGTCAGAGATGTTTATGAATACATGATTTCCCAACTTAAAGAGAAAGGTCGGTCAAAAGGTGGTGAAGGTGAAGATATCACCTCACAGAAGTTGCAATCTGCTTATGATGAATACAGAGAAGAGGCAACACTCTGTGCTTTTCGAGGACTTGAAGAAGATGATAATGGTGATTGTGAGAATGACAATGATGCAGATGAAGGTGGTGAATTGAGTTTTGATTATGCGTTAAACAAGCAGGGGCTAACATCTTTTCCACATCACAGAACTCAACAGAGGCGCAAAACTTCCGTGGCTAAAATTTGTTTGGTTGTTATGCCTAGTTAAAAGAAGTTTGACCCAGCTGAAAAACTGAGGCAACTTCTAACTTTGACTTCATCAAAGTCTAATACCCATGTGCTTCCTACACCTGTGGACATAAAAGAAAATAATGTGAAAACAAGCAGCTCAACCCCCCACACAACTGCAAGTGAACGTTCATACAATTTGTGGCATTATTCCCCACTGGATGACAAAAAGATCGAGAAACATTTTAGTGATGGTAAATTGTGTGAACCAACTATCTCCAGAGATCAGTCTGGTCTCAAAGAAAGCAACACCCGCAACACATCCACTCAGCTACCACGCCCTTCCAGGGAGGGATTGTCACCTCCACGAATTGATGCATCTAATGTTTCTGATACTAAGAAAATCAATAGACAGGCCTTTTCAGGTCCATTGCCTAGTAAACCACCGTCAATAAAACCTTTATATGTCAGCTCTTTAGCGTCTATTGATTCAGCATCTGGAGTTCTTTCTCGATTACCAATGCCACAACTTTCATCTCCAAAAGCTTCTCCTAGTGCTTCACCTCCCCTTGTTTCTTCACCTGGGATAGGTCACTCTGCTCCATTGACTTTGAGAAATGAAAAGCATTCTGCGACGAACAAATTTCCTTCCTTTGCTTCAAGTGCAGCATCCCCACTTCCAACTCCACCTTTACTTGTCCCTCGAAGTTTTTCTATATCCTCTAGCAGCCAGAGAGGGATGACATTACATGCTGCAGAACTTTTGGATGCTTCCAAGTTCCGCAGAGGGCAGAAGAAATTGGATCTCCTCCTTCAACTCCTTTATCCCTCTCAGACATCAAAAGAGCACCAAGTATATCTGGCCTGGCTTCCCATTCCAGTGGAATTAAAGGTGGGAGCTAAACGTGGCACATATATTGTATATAGAGACCGAAGTTCTGGGGGTTGA 1464 0.4269 MQEMRNCYDCLLSAAAATANSANGACLLEKTPVNDDEENDGSGLQRSHIIVTIINPSESLLNELRTVEEHSRVSCIFVRDVYEYMISQLKEKGRSKGGEGEDITSQKLQSAYDEYREEATLCAFRGLEEDDNGDCENDNDADEGGELSFDYALNKQGLTSFPHHRTQQRRKTSVAKICLVVMPSXKKFDPAEKLRQLLTLTSSKSNTHVLPTPVDIKENNVKTSSSTPHTTASERSYNLWHYSPLDDKKIEKHFSDGKLCEPTISRDQSGLKESNTRNTSTQLPRPSREGLSPPRIDASNVSDTKKINRQAFSGPLPSKPPSIKPLYVSSLASIDSASGVLSRLPMPQLSSPKASPSASPPLVSSPGIGHSAPLTLRNEKHSATNKFPSFASSAASPLPTPPLLVPRSFSISSSSQRGMTLHAAELLDASKFRRGQKKLDLLLQLLYPSQTSKEHQVYLAWLPIPVELKVGAKRGTYIVYRDRSSGG 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0616 487 MobiDBLite consensus disorder prediction 267 287 - -
Lele05g0616 487 MobiDBLite consensus disorder prediction 297 311 - -
Lele05g0616 487 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 368 439 IPR037488 -
Lele05g0616 487 MobiDBLite consensus disorder prediction 343 364 - -
Lele05g0616 487 MobiDBLite consensus disorder prediction 260 319 - -
Lele05g0616 487 MobiDBLite consensus disorder prediction 343 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0616 Lele-ChrLele05 3632283 3636275 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0616 05 3632283 3636275 Lele05g0616 05 3632283 3636275 ECH
Lele05g0616 05 3632283 3636275 Lele07g0646 07 3688287 3692303 hybridization
Lele05g0616 05 3632283 3636275 Lele08g0443 08 2722148 2727771 hybridization