Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0582 ATGTATGTCTACATGAATATTTCAAGACCAGAGGCATTAATGAAGTTTCACTGTGTCGCCTTTAAGAGCTTGAATGAAGACAATGTAAATGACCATTCATCTTTAAAACGTAACCGAGAACAAGAAAAACTGTTTGCAGCGCAATTGCAAGCTGTACGTGGCTTTGGCAGCCAGGAAATGCAGCTGGCAACTGCCCTGAAGCACAATTTACTGGCGGGGTCCATGTTTTCTACCAATGATTTTCTCAACATCTATATACGACCTGAAGTTAAACATATTCACCGTCATAATCTGCTGACAGATGACTGCCAACGAAGTTCCACAACTTCACGGACAATAAAAATCCAGCCACCTGCTCTACAGCCAGTCTCTCTAGCTTCTTCTGCGTTTCATAGTCAAGTCGGCAAAAAAGGGTTTCAAAAGGTGGACAGCATGCACAGCTTTTGGCAATTGGGAGATGAGCTCCGAGGACACTCGAAGACATCAGAGGATCATAAATGGTTAATGGCGGCTTCTAAATTAGCTGAACAAACAAGGTCAAAGGGAGACCGTGTCAATAACCTTGATCTATCAAAAGGCCCAATAGAAACAAGGTCAAGGGATAAGTTTGGGATCCAAGAAGATAACAAATTTGACACTCTGAACTTCAGCATGCTGAACCTGGAATCTAAGTTTACTGAAAATATGGGCAAAAGTTCCCTCAGGAATGGAGTTTATAATATGAATGTGGTGTACCCAAAAAACAATGCAAGCTTAGTGTCAAACATTAGTGGCAACAAGTATAACAACAACCTTCAGAACAACAAAGAGACCAACAATAATGGAAACAGTGGTAGCAATAATGAAAATGGCAACACAAATGCAGCTGACAAAAGGTTCAAGACCTTGCCTGCATCAGAGACACTCCCACGGAATGAGGTGCTTGGTGGATACATCTTTGTTTGTAACAATGACACAATGCAAGAAGACTTAAAGCGTCAGCTATTTGGTTTGCCACCAAGATATCGGGATTCTGTCCGGGCAATAACACCAGGGCTACCACTTTTCCTGTATAACTACACTACTCATCAGTTGCATGGTGTCTATGAGGCTGCAAGTTTTGGGGGCTCTAACATAGTTCCAACTGCATGGGAGGATAAAAAATGCAAAGGCGAGTCAAGGTTTCCAGCTCAGGTGAGGATCCGTGTTAGAAAAATTTGCAATGCGCTGGAAGAAGATGCATTCAGGCCAGTCTTACATCACTATGATGGTCCAAAATTCCGTCTTGAACTGTCAGTTCCCGAGACCCTGAATCTGTTAGACCTTTGCGAACAAGCAGGCTCAGAAGCATAA 1332 0.4264 MYVYMNISRPEALMKFHCVAFKSLNEDNVNDHSSLKRNREQEKLFAAQLQAVRGFGSQEMQLATALKHNLLAGSMFSTNDFLNIYIRPEVKHIHRHNLLTDDCQRSSTTSRTIKIQPPALQPVSLASSAFHSQVGKKGFQKVDSMHSFWQLGDELRGHSKTSEDHKWLMAASKLAEQTRSKGDRVNNLDLSKGPIETRSRDKFGIQEDNKFDTLNFSMLNLESKFTENMGKSSLRNGVYNMNVVYPKNNASLVSNISGNKYNNNLQNNKETNNNGNSGSNNENGNTNAADKRFKTLPASETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGVYEAASFGGSNIVPTAWEDKKCKGESRFPAQVRIRVRKICNALEEDAFRPVLHHYDGPKFRLELSVPETLNLLDLCEQAGSEA 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0582 443 PANTHER - 265 440 IPR044832 GO:0034976
Lele05g0582 443 Pfam Development and cell death domain 309 435 IPR013989 -
Lele05g0582 443 SMART dcd 306 438 IPR013989 -
Lele05g0582 443 MobiDBLite consensus disorder prediction 256 289 - -
Lele05g0582 443 ProSiteProfiles DCD domain profile. 306 438 IPR013989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0582 Lele-ChrLele05 3425372 3433950 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0582 05 3425372 3433950 Lele05g0582 05 3425372 3433950 ECH
Lele05g0582 05 3425372 3433950 Lele07g0609 07 3485323 3488071 hybridization
Lele05g0582 05 3425372 3433950 Lele08g0410 08 2516773 2517830 hybridization