Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0407 ATGGCTTCCCAATCCCAAGAACTCAAACAGCGATTCAAAGATGAAACAAACACCGCCACAGCCACAGCCACAGCCACCGCCGTGGACGGCGAGAGCAAGATGGGTGGTAAAATCAGAGACGGGAAAATGGCCATGGCCAAACGAGGCCTTAGATCACTCGCCATAGCGGTGTTCGTTCCTCTGTCCCTTTCCCTGCTCAGCGCCTACTTGGGGTCCAGCAAAACTCACGCTGGCGTCGACCTTATAGATTCCGGGAAGCCCTTCTGGTTCCCGCCCATGTGGGCCCTGCATCTGACATGTCCGGCGTCGTGCTTCTTGATGGGCCTTGCCGCTTGGATGGTGTGGGCCAACGGAGGCTTCCATAGGTACCCTAACGCTCTCTTGTTTTACTTGGCCCAGCTTTTCTTGACTCTGCTGTGGGATCCGCTGGTGTTCGGGGCGGGAGCGACGCGGATCGGATTGATTCTGTGTTTCGGAATGTTTGGGGCCATGGTCGGGTGTTATCGTCTGTTTGGGCAGGTGAATCCCATCTCCGGCGATTTAATAAAGCCTTGTCTGGCATGGACTGCTTTCCTCTCTCTTGTAAATCTTAAGCTCGTTTTTGTTTGA 609 0.5452 MASQSQELKQRFKDETNTATATATATAVDGESKMGGKIRDGKMAMAKRGLRSLAIAVFVPLSLSLLSAYLGSSKTHAGVDLIDSGKPFWFPPMWALHLTCPASCFLMGLAAWMVWANGGFHRYPNALLFYLAQLFLTLLWDPLVFGAGATRIGLILCFGMFGAMVGCYRLFGQVNPISGDLIKPCLAWTAFLSLVNLKLVFV 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0407 202 FunFam translocator protein 2 49 202 - -
Lele05g0407 202 Pfam TspO/MBR family 58 200 IPR004307 GO:0016020
Lele05g0407 202 Gene3D TspO/MBR protein 48 202 IPR038330 -
Lele05g0407 202 CDD TSPO_MBR 86 200 IPR004307 GO:0016020
Lele05g0407 202 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 45 200 IPR004307 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0407 Lele-ChrLele05 2316587 2317195 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0407 05 2316587 2317195 Lele05g0407 05 2316587 2317195 ECH
Lele05g0407 05 2316587 2317195 Lele07g0426 07 2402501 2403091 hybridization