Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0404 ATGGATAAAGATTTAATACTACGAGAGTCAAGTTTATCAGGCTTAACTGCCATTGTTCAAGGGTCTCTCTCTCTCTCATACAAAAAGGACAGCCCAGACTACAAAGAATCACGCATCCAGGCTGAGGGATGGACCGCTGCTAGCCAAAAGGGAAAGAAAAAGAGGCGCATCAGGAAACAGAGACGAGTATTTGCTCCTGCAGAGGCGCGTTTGTCACTCATTTCCACTCTTCAAAGATCAATCTTGCCGATCGATGTTGTGGAATGGGCCGATCCAATCACAGGTGGGCCTCCTCTCTGTCGTCATCCTGAGGTTAAGTGGGCTCAGAGGGTTGACAAGATCTATATAACAGTGCAATTGCCAGATTCCAAGAATGCGAAAGTAGATCTAACTCCTGATGGCGTTTTCACTTTCTCTGCTAGCGCTGGTGCCAAAGACCAACTGTATGAGTCAAAATTGGAGCTTTTTGACAAGGTGAATGTAGAGGAGAGCAAAATTAATATAGGAGTCCGAAACATATTCTGTGTTATGCAAAAGGCAGAGAGTGGATGGTGGAAAAGGTTGCTGCGTGGAGAAGGCAAGGTTCCACATTACGTAAAAGTAGATTGGGACAAATGGGTGGATGAGGATGATGATAATGGAGGAGGACTTAGTGACTTGGACTTGGGTGGGATGGACTTCTCGAAATTTGGCGGGATGGGTGATGATGCTATGGGTGAAGATTTTGAAGAGAGTGATGATGAAGAGCAAGAACTGTCAAAGCCTGGTGGCGAACACGAGACTGACAAGGCCGGGGAGGCGGAGAAACATGAAGCTGCTTCAAGCTCATGA 831 0.4645 MDKDLILRESSLSGLTAIVQGSLSLSYKKDSPDYKESRIQAEGWTAASQKGKKKRRIRKQRRVFAPAEARLSLISTLQRSILPIDVVEWADPITGGPPLCRHPEVKWAQRVDKIYITVQLPDSKNAKVDLTPDGVFTFSASAGAKDQLYESKLELFDKVNVEESKINIGVRNIFCVMQKAESGWWKRLLRGEGKVPHYVKVDWDKWVDEDDDNGGGLSDLDLGGMDFSKFGGMGDDAMGEDFEESDDEEQELSKPGGEHETDKAGEAEKHEAASSS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0404 276 MobiDBLite consensus disorder prediction 237 251 - -
Lele05g0404 276 CDD p23_hB-ind1_like 103 211 - -
Lele05g0404 276 Gene3D - 100 219 IPR008978 -
Lele05g0404 276 MobiDBLite consensus disorder prediction 231 276 - -
Lele05g0404 276 Pfam CS domain 104 179 IPR007052 -
Lele05g0404 276 ProSiteProfiles CS domain profile. 100 189 IPR007052 -
Lele05g0404 276 SUPERFAMILY HSP20-like chaperones 100 243 IPR008978 -
Lele05g0404 276 PANTHER TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE 101 263 IPR045250 GO:0051879
Lele05g0404 276 FunFam Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 100 220 - -
Lele05g0404 276 MobiDBLite consensus disorder prediction 252 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0404 Lele-ChrLele05 2292506 2296306 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0404 05 2292506 2296306 Lele05g0404 05 2292506 2296306 ECH
Lele05g0404 05 2292506 2296306 Lele07g0423 07 2381597 2384143 hybridization
Lele05g0404 05 2292506 2296306 Lele08g0226 08 1359594 1363878 hybridization