Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0271 ATGCTGCGATTGAAAGCATTCCGGCCAACTAGTGATAAGATCGTCAAGATCCAATTGCATCCGACGTATCCGTGGATGGTCACAGCAGATGCATCAGATCGGGTCTCCGTTTGGAACTGGGAACACCGCCAGGTGATATACGAGCTAAAAGCTGGCGGAGTTGATGAGCGGCGTTTGGTCGGTGCCAAGTTGGAGAAGCTTGCCGAGGGAGAAACAGACTCCAAAGGGAAGCCCACAGAAGCCATTCGTGGAGGGAGTGTTATGCAGGTGAATTTTTATGACGATGATGTACACTTCTGGCAACTTTGGCACAATCGCTTTGCAGCTGCAGAGGCTCCATCAGCTGTACATCTTACATCAGCTTTTAGCTCTCCCGCCCCATCAACAAAGGGAAGGCATTTTCTTGTTATATGTTGTTCGAACAAAGCTATATTTTTGGACTTGGTGACAATGCGTGGCCGTGATGTACCAAAGCAGGAGCTTGATAACAAATCCCTCCTATGCATGGAGTTCCTTTATCGATCTGGTGGGGGTGATGGCCCTCTTGTTGCTTTTGGTGGATCTGATGGTGTCATTAGAGTTCTCTCAATGATAACCTGGAAGCTTGTGCGAAGATACACTGGAGGTCACAAAGGATCAATCTCTTGCTTGATGTCCTTCATGGCTGCTTCTGGTGAGGGTCTTCTGATTTCGGGTGCCAGTGATGGACTGCTTGTACTATGGAGTGCAGACCATGTACAAGATTCACGAGAACTTGTTCCGAAACTAAGCTTAAAGGCCCATGATGGTGGGGTTGTGGGAGTTGAGATTTCTAGGGTGATTGGAGGTGCTCCTCAGCTTATTACAATTGGTGCAGACAAGACCTTAGCTATATGGGACACAGTCTCCTTTAAGGAATTGCGACGGATAAAACCTGTTTCAAAATTGGCTTGCCATAGTGTGGCATCTTGGTGCCATCCTCGAGCTCCAAACCTTGATATTCTTACTTGTGTAAAGGACTCTCATATATGGGCAATTGAACATCCTACTTATTCTGCTCTCACAAGACCGTTGTGTGAATTAACCTCAGTTATTCCTCCTCAAGCTCTTGCATCTAATAAGAAGCTCAGGGTCTATTGTATGGTTGCACATGCTTTGCAGCCACATCTCGTTGCTACTGGAACCAACATTGGTGTTATAGTATGTGAGTTTGATCCTAGATCTCTTCCAGCTGTGGCACCCCTGCCAACACCAGCAGACAGCCGAGAGCATGCTGCTGTATATGTAGTTGAAAGGGAGCTCAAACTACTAAATTTTCAGCTAAACAATTCGGCAAATCCATCTCTTGGAAATAATAGCTCCTTGTCAGAAACAGGAAGATCTAGGAGTGATTTTGTGGAACCATTACCTATTAAGCAGGGGAGGAAACAAATTAATACACCTGTTCCTCATGAGTCATATTCTGTTCTTTCTATGAGCAGTTCAGGAAAGTATCTAGCTATTGTTTGGCCAGATATTCCTTACTTCTCTGTGTACAAGGTTAGTGACTGGTCAATTGTTGATTCCGGCAGTGCGCGGCTTCTTGCTTGGGATACCTGTCGTGACAGATTTGCCATATTGGAATCATCATTACCTCCTAGAATTCCTATTATTCCTAAGGGAGGTTCATCTAGAAGAGCAAAAGAGGCTGCTGCCGCTGCAGCACAAGCTGCCGCCGCCGCCGCTTCTGCTGCTTCCATGGCATCTGTTCAAGTGCGTATCTTGCTAGATGATGGAACATCTAACATACTAATGAGGTCTGTTGGTGCACGTAGTGAACCGGTCATTGGTTTGCATGGAGGGGCTTTGCTTGGTGTTGCCTACCGAACATCTAGGAGAGTCAGTCCAGTTGCTGCTACAGCTATTTCAACAATTCAGTCCATGCCCTTATCAGGTTATGGGAGCAGTGGTCTTTCTTCGTTTACTACTTTTGATGATGGATTTTCCTCGAACAGATCTCCAGCTGAGGCAGCTCCCCAAAACTTCCAGCTATACAGCTGGGAGACTTTCCAGCCCGTGGGCGACCTGCTTCCTCAGCCAGAATGGACTGCTTGGGACCAAACTGTTGAGTACTGTGCGTTTGCATATCAACATTACATAGTCATATCATGTTTGCGTCCACAATATAGATACCTGGGAGATGTTGCAATTCCATACGCTACTAGTGCTGTTTGGCACCGAAGGCAACTGTTTGTAGCCACACCAACTACTATAGAAATTGTTTTTGTGGATGCTGGGGTTGCGCAAATTGACATAGAAACTAAGAAGATGAAGCAGGAGCAAAGAATGAAAGAAGCACGAGCAAGAGCAGTAGCTGATCATGGAGAGTTAGCGCTAATTACAGTGGATGGTCCCCAATCTACTACTGAAGAAAGAATATCATTGAGGCCACCAATGTTACAGGTGGTGCGATTGGCTTCATTTCAGCACGCTCCTTCAGTGCCACCTTTCATATCGTTGCCAAAACATTCTCGAGTTGATAGTGATGACTCTGGGATGGCGGAAGAAAGAAAAGCCAGTGAAATAGCTGTTGGTGGTGGGGGAGTGTCTGTTGCTATTACTCGGTTCCCATTGGAGCAGAAACGTCCTGTTGGGCCCCTGGTTGTGGTGGGCGTCAGAGATGGAGTCCTTTGGGTAATTGACAGGTACATGTGTGCACATGCTTTGTCCCTGAGTCATCCAGGTATTCGTTGCCGATGTCTTGCTGCTTATGGTGATGCTGTTAGTGCCATAAAATGGGCAAGTAGGCTTGGGAGAGAACACCATGATGATTTAGCTCAGTTTTTGCTGGGAATGGGTTATGCTACTGAAGCACTTCATTTGCCTGGAATATCTAAAAGGTTGGAGTTCGATCTGGCAATGAAGAGTAATGATTTGAAGAGAGCCCTCCAGTGCCTTCTTACAATGAGTAACAGCAGGGGCATAGGACAGGATAACACCGGGCTTGGTTTGACTGACATACTTAATTTGACAGATAAAAAAGAGGATGTAGTTGAAGCGGTTGAGGGCATAGTGAAGTTTGCAAAAGAGTTCTTGGATCTTATCGATGCTGCAGATGCTACTGCACAAAGTGAAATTGCTCGTGAAGCTCTCAAAAGGTTAGCTGCAGCAGGTTCAGTCAAAGGTGCTTTACAAGGTCACGAGTTGAGGGGGTTAGCCTTACGCCTCGCAAATCATGGGGAGTTAACACGGCTAAGTGGCTTGGTAAATAATTTGGTAACTCTTGGCTTGGGACGGGAAGCTGCTTTTGCTGCCGCAGTTTTGGGAGACAACGCTCTAATGGAAAAGGCATGGCAGGATACTGGGATGCTGGCAGAAGCCGTGCTTCATGCTCATGCACATGGACGCCCGACATTGAAGAACTTGGTTCAGGCCTGGAACCAAATGCTACAGAGAGAGATGGAGCCTGCTTCATCGCAGAAGACAGATGCTGCATCTGCATTCTTTGCCTCTCTAGAGGACCCCAAACTTACAAGTTTGGCAGATGCAGGGAAGAAACCCCCAATTGAAATCCTACCTCCAGGGATGACGTCTCTTTCTGCATCGATCGCCATTCAAAAGAAACCAGCTTCTGCTGCTCAGAATTCACAGCAGCCACCTGGCAAGCCATTGGCATTGGAAGCTCCTCCAACAGCCACCACGGCAGAGCCAACAAGTGCACCACCTCCGCAGCCATCTGAATCCACACCTGCACCAGTTACTGATTCAGCTCCATCACAGTCCGCTCCAGACTCCCAACCGGATTCAGTGGCTGCTCCGTCCCAGCCGGAATCAGGGGACACCGATGTAGATAAAAAAGAAGCTCCTGCCTCTGCATCAGCAAATGATGCTGATCAGACTGCTAGCGGGGAAACCGTTCAATCAGCGTCTACAAGCAGTCCAACAGAGGCCCCACCGACAGTAGCTGCGGCTGAGCAGACCAATGTTCCAACTGCAGTATCCGTCGCTGACTTCCTCGCATGA 3981 0.4753 MLRLKAFRPTSDKIVKIQLHPTYPWMVTADASDRVSVWNWEHRQVIYELKAGGVDERRLVGAKLEKLAEGETDSKGKPTEAIRGGSVMQVNFYDDDVHFWQLWHNRFAAAEAPSAVHLTSAFSSPAPSTKGRHFLVICCSNKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRSGGGDGPLVAFGGSDGVIRVLSMITWKLVRRYTGGHKGSISCLMSFMAASGEGLLISGASDGLLVLWSADHVQDSRELVPKLSLKAHDGGVVGVEISRVIGGAPQLITIGADKTLAIWDTVSFKELRRIKPVSKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTSVIPPQALASNKKLRVYCMVAHALQPHLVATGTNIGVIVCEFDPRSLPAVAPLPTPADSREHAAVYVVERELKLLNFQLNNSANPSLGNNSSLSETGRSRSDFVEPLPIKQGRKQINTPVPHESYSVLSMSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESSLPPRIPIIPKGGSSRRAKEAAAAAAQAAAAAASAASMASVQVRILLDDGTSNILMRSVGARSEPVIGLHGGALLGVAYRTSRRVSPVAATAISTIQSMPLSGYGSSGLSSFTTFDDGFSSNRSPAEAAPQNFQLYSWETFQPVGDLLPQPEWTAWDQTVEYCAFAYQHYIVISCLRPQYRYLGDVAIPYATSAVWHRRQLFVATPTTIEIVFVDAGVAQIDIETKKMKQEQRMKEARARAVADHGELALITVDGPQSTTEERISLRPPMLQVVRLASFQHAPSVPPFISLPKHSRVDSDDSGMAEERKASEIAVGGGGVSVAITRFPLEQKRPVGPLVVVGVRDGVLWVIDRYMCAHALSLSHPGIRCRCLAAYGDAVSAIKWASRLGREHHDDLAQFLLGMGYATEALHLPGISKRLEFDLAMKSNDLKRALQCLLTMSNSRGIGQDNTGLGLTDILNLTDKKEDVVEAVEGIVKFAKEFLDLIDAADATAQSEIAREALKRLAAAGSVKGALQGHELRGLALRLANHGELTRLSGLVNNLVTLGLGREAAFAAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNQMLQREMEPASSQKTDAASAFFASLEDPKLTSLADAGKKPPIEILPPGMTSLSASIAIQKKPASAAQNSQQPPGKPLALEAPPTATTAEPTSAPPPQPSESTPAPVTDSAPSQSAPDSQPDSVAAPSQPESGDTDVDKKEAPASASANDADQTASGETVQSASTSSPTEAPPTVAAAEQTNVPTAVSVADFLA 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0271 1326 SMART WD40_4 154 196 IPR001680 GO:0005515
Lele05g0271 1326 SMART WD40_4 199 242 IPR001680 GO:0005515
Lele05g0271 1326 SMART WD40_4 251 293 IPR001680 GO:0005515
Lele05g0271 1326 SMART WD40_4 1 39 IPR001680 GO:0005515
Lele05g0271 1326 MobiDBLite consensus disorder prediction 1221 1235 - -
Lele05g0271 1326 MobiDBLite consensus disorder prediction 1279 1316 - -
Lele05g0271 1326 MobiDBLite consensus disorder prediction 1191 1207 - -
Lele05g0271 1326 ProSiteProfiles Trp-Asp (WD) repeats profile. 258 302 IPR001680 GO:0005515
Lele05g0271 1326 MobiDBLite consensus disorder prediction 1236 1262 - -
Lele05g0271 1326 SUPERFAMILY WD40 repeat-like 5 309 IPR036322 GO:0005515
Lele05g0271 1326 Gene3D - 905 1154 - -
Lele05g0271 1326 Gene3D - 106 495 IPR015943 GO:0005515
Lele05g0271 1326 MobiDBLite consensus disorder prediction 1191 1316 - -
Lele05g0271 1326 PANTHER TSET COMPLEX MEMBER TSTF 1 1258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0271 Lele-ChrLele05 1526673 1537786 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0271 05 1526673 1537786 Lele07g0288 07 1577693 1588859 hybridization
Lele05g0271 05 1526673 1537786 Lele08g0092 08 540763 544929 hybridization