Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1640 ATGGCCACGCTTCCCCTGTCGAGCCCAACCGAGTTGTTCTCGTCCTCGTCAATTGCCACTCTAATTTATCCCAATGCATTCTCTTCCTCTTCCTTTGTTTCCTGCAAACCCAGAAGAAAAAGTGCCTTCGGACGCCAGAGTCGTCGTTCTCTGTCCGTGAGCTGCTCTTTCGCAGCACCTCTAGACAATGCCAAGATAAAGGTGGTCGGAATCGGTGGCGGTGGCAACAATGCTGTTAATCGCATGATTGGTAGTGGTTTACAAGGAGTAGATTTCTATGCAATAAATACTGATGCCCAGGCACTGTTACATTCTAATTCGGAAAATCCAATTAAAATTGGGGAACTTCTGACTCGTGGATTAGGTACTGGTGGGAATCCATTGTTAGGGGAGCAAGCCGCAGAGGAATCAAAAGAAGCAATTGCTAATGCCCTTAAAGGATCAGATCTTGTCTTCATAACAGCTGGTATGGGTGGGGGCACTGGGTCTGGTGCTGCCCCGGTTGTGGCACGACTATCAAAAGAGGCTGGTTATTTGACAGTTGGTGTGGTTACATATCCATTCAGTTTTGAAGGACGCAAAAGATCCTTGCAGGCACTGGAAGCAATAGAAAAGCTGCAGAAAAATGTTGATACACTTATAGTAATTCCAAATGATCGTCTGCTTGACATTGCTGATGAGCAGACACCTCTTCAGGATGCTTTCCTTCTTGCAGATGACGTTTTGCGCCAAGGGGTACAAGGAATAGCAGACATCATCACAATACCTGGGTTGGTGAATGTGGATTTTGCTGATGTTAAAGCTGTGATGAAAGATTCTGGAACTGCAATGCTTGGAGTAGGTGTTTCCTCTAGCAAAAATCGTGCTGAAGAAGCAGCAGAACAGGCTACTTTGGCTCCTCTAATTGGATCGTCTATTCAGTCAGCTACTGGAATTGTATATAATATTACTGGAGGAAAGGACATAACCCTACAGGAGGTGAACAGAGTGTCTCAGGTTGTGACAAGTTTGGCCGATCCTTCTGCTAATATTATATTTGGGGCTGTTGTCGATGATCGCTATAATGGAGAGATTCACGTGACTATAATCGCAACCGGCTTCTCGCAGTCATTTCAGAAGACCCTACTAACAGATCCTAAGGCTGCAAAGATGGCTAATAAAAGGGATGGAGGCCAAGAAAGCAAGGCAATGCCTCCTCCACTCTCAAGCACACCGTCAACAGCTGCATCTTCTAGAGCATCCCCGCGAAGGCTCTTCTTTTAG 1263 0.4592 MATLPLSSPTELFSSSSIATLIYPNAFSSSSFVSCKPRRKSAFGRQSRRSLSVSCSFAAPLDNAKIKVVGIGGGGNNAVNRMIGSGLQGVDFYAINTDAQALLHSNSENPIKIGELLTRGLGTGGNPLLGEQAAEESKEAIANALKGSDLVFITAGMGGGTGSGAAPVVARLSKEAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDIADEQTPLQDAFLLADDVLRQGVQGIADIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIQSATGIVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKTLLTDPKAAKMANKRDGGQESKAMPPPLSSTPSTAASSRASPRRLFF 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1640 420 Hamap Cell division protein FtsZ [ftsZ]. 61 391 IPR000158 GO:0003924|GO:0005525
Lele04g1640 420 Pfam Tubulin/FtsZ family, GTPase domain 65 225 IPR003008 GO:0005525
Lele04g1640 420 Gene3D Tubulin/FtsZ, GTPase domain 59 272 IPR036525 -
Lele04g1640 420 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 158 164 IPR017975 GO:0005525|GO:0005874|GO:0007017
Lele04g1640 420 SUPERFAMILY Tubulin nucleotide-binding domain-like 64 260 IPR036525 -
Lele04g1640 420 MobiDBLite consensus disorder prediction 397 413 - -
Lele04g1640 420 FunFam Cell division protein FtsZ 1, chloroplastic 58 272 - -
Lele04g1640 420 SUPERFAMILY Tubulin C-terminal domain-like 259 374 IPR008280 -
Lele04g1640 420 FunFam Cell division protein FtsZ 1, chloroplastic 230 367 - -
Lele04g1640 420 TIGRFAM ftsZ: cell division protein FtsZ 60 378 IPR000158 GO:0003924|GO:0005525
Lele04g1640 420 ProSitePatterns FtsZ protein signature 2. 149 170 IPR020805 GO:0005525
Lele04g1640 420 MobiDBLite consensus disorder prediction 381 420 - -
Lele04g1640 420 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 46 380 IPR045061 GO:0003924|GO:0005525
Lele04g1640 420 CDD FtsZ_type1 78 366 IPR000158 GO:0003924|GO:0005525
Lele04g1640 420 ProSitePatterns FtsZ protein signature 1. 96 130 IPR020805 GO:0005525
Lele04g1640 420 PRINTS Cell division protein FtsZ signature 178 199 IPR003008 GO:0005525
Lele04g1640 420 PRINTS Cell division protein FtsZ signature 150 170 IPR003008 GO:0005525
Lele04g1640 420 PRINTS Cell division protein FtsZ signature 264 285 IPR003008 GO:0005525
Lele04g1640 420 PRINTS Cell division protein FtsZ signature 241 263 IPR003008 GO:0005525
Lele04g1640 420 Pfam FtsZ family, C-terminal domain 274 367 IPR024757 -
Lele04g1640 420 SMART Tubulin_C_4 259 376 IPR018316 -
Lele04g1640 420 SMART Tubulin_4 65 257 IPR003008 GO:0005525
Lele04g1640 420 Gene3D - 273 382 IPR037103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1640 Lele-ChrLele04 21240494 21243323 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1640 04 21240494 21243323 Lele04g1640 04 21240494 21243323 ECH
Lele01g1374 01 8451383 8454274 Lele04g1640 04 21240494 21243323 hybridization
Lele02g1655 02 20306864 20309689 Lele04g1640 04 21240494 21243323 hybridization