Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1577 ATGCTACTGCTGACGTGGCGCACTGCAGCGCTTCCGACCTTTTCTCACACTCCTATGGTGTGCTGCTTTCGAGGACTTGAAAGGGGAATCTTTTTTGTTTCAACGGAGAATTTTCTAGCGGATTTGAGCGGTGATGTCTTGTGTGGTTTCTCGGTTTCGGTCGGTATTTTGGAGTTTCGAAGGAAAGTGGAGATCGTTGACAGGCTGTTTGACGAGCTTGGTTTATGCCCGAGCGACTTCATATTGTATCAGTTTTCATTCTGCAGTCTTGTTTCCAGGTCTAATATTCACATAGAATACACTATGGTAGCAAAAAGTCGGAATGCTGCTAACTCTCCAAGTCCAAAACCAGAGGTTGGAGAGATTGATACCAGTCCACCTTTTCATTCTGTTAAGGATGCTGTCAATCTATTCGGTGAAGGATCTTTATCTGGGGAAAAACCTGCGATTAGAAAGGCAAAGGCTTATTCTGCTGAGAGAGTTTTGGCCAAGGAGACACGACTTCACTTAGCCCAAAAAGAGCTGAACAAGTTAAAGGAACATCTAAAGAATGCTGAAACCACTAAAGCTCAAGCTCTAGTGGAGCTTGAAAAGTCTAAAAGAACTGTTGATGATCTGACAGAAAAATTAAAGGCTCTAAATGAATCCAGGGCACTATCCATTAAGGCAACTGAAGCTGCTAAAAATCAGGCACAACAGCTTAAAGAAGAAAAGTATGGCGACCCTGTTGAAAGTAATGGTGCTTGGAAAGAAGAGTTAGAAACTGCAGTTAAGAAGTATGCATCTGTTATCACAGAACTTGATGCTTCTAAGCAAGAACTGAGGAATATTCGTCAGGAGTGTGATTCATCCTTGGAAGCGAGACTTTCTGCTTTCAAGCTAGCATCAGAAGCTGAGGACTTGATGAAGGCAAACACAGAAAGAGCAGCTGAGCTGTCTAAAGAAATTTCCTCTGTGCAGGAATCGGTTGAGCAAATGAAGCTTGCTACTGTGCAGGCACAGCAAGATCAAGCTAGGATATTATCTGAGAAAGATGTACTGAGACAATCATATAAAGCCACCGTTGAAAATTCACAAAAGAAATTGCTTGCTTTAAAAAAGGAATTCAATCCTGAGCTCACCAAAAATCTTGAGGTGCAGCTGAACGAGACAATGAATCAAATTGAGGCTCTGCAAAAAGAAATGGAAAGTAAGAAGACTTCAGACTTGGATACCGTGAAAAGTGTCACATTGGAGCTTGATGATGCCAAGGGATCACTGCAGAAAGTCGCAGAAGAGGAAATGTCTCTTAGAAGTTTGGTGGGAGCTCTTAAGGTGGAACTGGATAATGTGAAAAGGGAGCATTCTTTATTGAAGGAGAAAGAATCAGAAACTGAATCTGTCGTGGGGAATCTGCATGTCCAACTCCGGAAAAGTAAGTCTGAGCTGGAAGCGTGCATGGCAGAAGAGTCCAAGGTTAGAGGTGCATCTGAGGAAATGATCTCGACACTGAACAACATGTCATCTGAAACTGAAAATGCACGGAGGGAAGCTGAAGATATGAAGGCTAAGGCTGAAGAGTTGAAGAAGGAAGCTGAAGTCGCCAAAGTTGCATTAGAAGATGCAGAGAAAAAGCTTAGTGTAGCGCTGGAAGAAGCAGAAGCAGCAAAAGCAGCTGAGGCAAGTGCTCTTGATCAGATTAGGGTCTTATCTGAGAGGACTAGTGCAGCGCGTGCATCAACTTCTGAATCTGGTTCTAAAATTACAATTTCAAAGGAGGAGTTTGAATCACTGAGTCAAAAAGTTGAGGAGTCTGATAAATTAGCTGAAATGAAAGTAGCTGCTGCTGTGGCACAGGTTGAAGCAGTGAAGGCCAGTGAACAGGAGGTTATCCAAAGGTTAGAGGCAACTCAGAAGGAGATCGAGGATATGAAGGCTGCAACACAGGAGGCCTTGAAAAAGGCTGAGATGGCTGAAGCTGCAAAGAGAGTTGTGGAGAACGAGCTTCGCAAATGGCGTGAACGGGAGCAGAAGAAAGCAGCAGAGGCTGCATCACGTATATTGGCTGAAACACAGGTTTCATCAGAGTCATCTCCACTCCATTATACGATTCAAAAGCCAATTCAACCTCCAAAAGCTGTTGAGGTGCGCAAGTTGGAGAAAGAAAAGGTTTCAATTTCAAAGAAGGTACTCCTGCCTAATCTATCCGGCATCTTTCACCGGAAAAAGAACCAGGTTGAGGGCGGATCTCCATCTTACCTCCCCGGTGAAAACCCAGTGTGA 2262 0.4372 MLLLTWRTAALPTFSHTPMVCCFRGLERGIFFVSTENFLADLSGDVLCGFSVSVGILEFRRKVEIVDRLFDELGLCPSDFILYQFSFCSLVSRSNIHIEYTMVAKSRNAANSPSPKPEVGEIDTSPPFHSVKDAVNLFGEGSLSGEKPAIRKAKAYSAERVLAKETRLHLAQKELNKLKEHLKNAETTKAQALVELEKSKRTVDDLTEKLKALNESRALSIKATEAAKNQAQQLKEEKYGDPVESNGAWKEELETAVKKYASVITELDASKQELRNIRQECDSSLEARLSAFKLASEAEDLMKANTERAAELSKEISSVQESVEQMKLATVQAQQDQARILSEKDVLRQSYKATVENSQKKLLALKKEFNPELTKNLEVQLNETMNQIEALQKEMESKKTSDLDTVKSVTLELDDAKGSLQKVAEEEMSLRSLVGALKVELDNVKREHSLLKEKESETESVVGNLHVQLRKSKSELEACMAEESKVRGASEEMISTLNNMSSETENARREAEDMKAKAEELKKEAEVAKVALEDAEKKLSVALEEAEAAKAAEASALDQIRVLSERTSAARASTSESGSKITISKEEFESLSQKVEESDKLAEMKVAAAVAQVEAVKASEQEVIQRLEATQKEIEDMKAATQEALKKAEMAEAAKRVVENELRKWREREQKKAAEAASRILAETQVSSESSPLHYTIQKPIQPPKAVEVRKLEKEKVSISKKVLLPNLSGIFHRKKNQVEGGSPSYLPGENPV 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1577 753 Coils Coil 348 368 - -
Lele04g1577 753 Pfam Weak chloroplast movement under blue light 121 671 IPR008545 -
Lele04g1577 753 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 120 723 - -
Lele04g1577 753 Coils Coil 434 454 - -
Lele04g1577 753 Coils Coil 295 329 - -
Lele04g1577 753 MobiDBLite consensus disorder prediction 734 753 - -
Lele04g1577 753 Coils Coil 260 287 - -
Lele04g1577 753 Coils Coil 610 668 - -
Lele04g1577 753 Coils Coil 374 401 - -
Lele04g1577 753 Coils Coil 497 552 - -
Lele04g1577 753 Coils Coil 161 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1577 Lele-ChrLele04 20618183 20633716 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1577 04 20618183 20633716 Lele25g1430 25 10485389 10486144 CCT
Lele04g1577 04 20618183 20633716 Lele26g1460 26 10366235 10366990 CCT
Lele04g1577 04 20618183 20633716 Lele27g0652 27 14475898 14476656 CCT
Lele01g1315 01 8022088 8025389 Lele04g1577 04 20618183 20633716 hybridization
Lele02g1587 02 19768565 19772132 Lele04g1577 04 20618183 20633716 hybridization