Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0962 ATGACCTTGATTCGAAATCGCTGGCCTATCTCAATATCGAGGATGGCGGAAGAGGTAAAGACGGCTGACCTAGGATCCTCTGCTACTACTTCTGCAAAAACTAGACGCTCCTGGTCTTCTATTCTTCGTTGGATTCCCACGTCCACCCAACACATCATCGATGCGGAGAAGCGTCTTCTCTCCCTTGTCAAGACTCCTTTTGTTCAAGAATTGGTTAATATAGGCTCTGGTCCACCAGGGTCGAAAGTTACATGGTTTCGTTCGTCAAGCAATGAGCCTAGGTTTATCAATACTGTAACATTTGAGAGCACGCAAAATTGTCCTACGCTCGTAATGGTTCATGGATATGGTGCTTCGCAGGGTTTCTTTTTCCGTAATTTTGAAGCGCTTGCCAGGCGTTTCAGAGTCATTGCTATTGATCAACTTGGTTGGGGTGCATCAAGCAGGCCTGATTTTACATGCAGAAGCACAGAAGAAACTGAGGCATGGTTTATCGATTCTTTTGAGGAATGGAGAAAAGCCACAAATCTAACCAATTTTATACTACTTGGACATTCTTTTGGGGGTTATGTTGCTGCTAAATATGCCATCAAGCACCCTGAGCACGTACAGCACTTGATTTTGGTGGGACCTGTTGGATTTACATCAGAATCAGAGCCCAAACCTGAGTGGTTTACAAAATTTAGAGCAACTTGGAAAGGAGCAGTCATGAACCATCTTTGGGAGTCTAATTTTACACCTCAAAAACTTGTCAGAGGATTAGGTCCTTGGGGTCCTGATATAGTCCGCAAGTATACAAGTTCTAGGTTTGGTACACATTCAACTGGTGAAGCATTGACTGAAGAGGAATCAGGATTGTTGACAGATTATGTTTACCATACCTTAGCGGCCAAATCTAGTGGAGATCTGTGCTTAAAATATATATTTTCTTTTGGAGCCTTTACTAAGATGCCCCTTCTTCACAGAGCCTCAGAGTTGAAGGTACCAACCACTTTCATATATGGTTTCCAGGATTGGGTGAGTTATATTGGGGCCCAAGAAGCTCGTAAGCATATGAATATTCCATGTGAAATCATCAGGGTTCCTCGGGGTGGCCACTTTGTGTTCATTGATAACCCAACTGGCTTTCATTCAGCTGTGTTTTATGCTTGTCGAAGGTTTCTTTCACCTGATCCAGACATTGAAACCCTTCCTGAAGGCCTGACCTCTGCATAG 1215 0.4362 MTLIRNRWPISISRMAEEVKTADLGSSATTSAKTRRSWSSILRWIPTSTQHIIDAEKRLLSLVKTPFVQELVNIGSGPPGSKVTWFRSSSNEPRFINTVTFESTQNCPTLVMVHGYGASQGFFFRNFEALARRFRVIAIDQLGWGASSRPDFTCRSTEETEAWFIDSFEEWRKATNLTNFILLGHSFGGYVAAKYAIKHPEHVQHLILVGPVGFTSESEPKPEWFTKFRATWKGAVMNHLWESNFTPQKLVRGLGPWGPDIVRKYTSSRFGTHSTGEALTEEESGLLTDYVYHTLAAKSSGDLCLKYIFSFGAFTKMPLLHRASELKVPTTFIYGFQDWVSYIGAQEARKHMNIPCEIIRVPRGGHFVFIDNPTGFHSAVFYACRRFLSPDPDIETLPEGLTSA 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0962 404 Gene3D alpha/beta hydrolase 94 385 IPR029058 -
Lele04g0962 404 FunFam Probable 1-acylglycerol-3-phosphate O-acyltransferase 94 384 - -
Lele04g0962 404 PANTHER RE40534P-RELATED 41 381 - -
Lele04g0962 404 Pfam alpha/beta hydrolase fold 108 373 IPR000073 -
Lele04g0962 404 SUPERFAMILY alpha/beta-Hydrolases 98 380 IPR029058 -
Lele04g0962 404 PRINTS Epoxide hydrolase signature 133 148 IPR000639 GO:0003824
Lele04g0962 404 PRINTS Epoxide hydrolase signature 361 383 IPR000639 GO:0003824
Lele04g0962 404 PRINTS Epoxide hydrolase signature 328 344 IPR000639 GO:0003824
Lele04g0962 404 PRINTS Epoxide hydrolase signature 196 209 IPR000639 GO:0003824
Lele04g0962 404 PRINTS Alpha/beta hydrolase fold signature 182 195 IPR000073 -
Lele04g0962 404 PRINTS Alpha/beta hydrolase fold signature 133 148 IPR000073 -
Lele04g0962 404 PRINTS Alpha/beta hydrolase fold signature 196 209 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0962 Lele-ChrLele04 5944985 5949823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0962 88 211 Acyl Lipid Metabolism Gene Families AT1G64670 30.827 2.45e-10 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0962 04 5944985 5949823 Lele04g0962 04 5944985 5949823 ECH
Lele01g0965 01 5580047 5587037 Lele04g0962 04 5944985 5949823 hybridization
Lele02g0967 02 5884106 5888266 Lele04g0962 04 5944985 5949823 hybridization