Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0856 ATGCCACCATTTTGGTCGACCTCAAAAGCACTCCGATGCTTTGTATCTCGTAAAACTGGTGTCAAACAATTAATTAGTTCCGGCACGAGCCTTGGGCAGCTCGCGAAACTCGATCGGTGCCAATGCATCAGTACTATTGCGGGTGGCCAGAACCGGTCCATTTACAAACCCCTTGGCTGCTACGATGATTCTATATCCGTAATTGGAGGTTTGCATAAGAATAATTTTGTTCAAACGAGGCAGTTTCTTGGATGTGGAGATGGTGAAGAAGGGGTACTATCCAAAGTATACGAGGAGAAGCTCGTTTTGGGGTACTCTCCAGAGCAATTATTTGACGTCGTTGCCGCTGTTGACTTCTATCATGGTTTTGTCCCATGGTGTCAGAAATCTGAGATAATTAAACACTATCCAGATGGATCATTTGATGCTGAGCTGGAGATTGGATTTAAATTTCTTGTTGAGAGTTATGTTTCCCATGTTGAATTGGAAAGACCTAAGCGAATAAAGACCACTGTATCACAGAGTACCCTGTTTGACCATTTGATAAACATATGGGAATTTAGTCCTGGGCCAGTTCCAAGATCATGCAATGTTTATTTCTTGGTGGATTTTAAGTTTCAATCTCCACTTTACAGACAGGTTGCTTCAATGTTCTTTAAGGAGGTGGCCTCTAGAATGGTTGGCTCGTTTACTGAGCGTTGCCGTTTGATATATGGACCAGAGGTGCCAATCCTTGAAAATTCGTATGGTGAAAGACCACAAAGTTATCCTTCACGTCGCAATTAG 786 0.4275 MPPFWSTSKALRCFVSRKTGVKQLISSGTSLGQLAKLDRCQCISTIAGGQNRSIYKPLGCYDDSISVIGGLHKNNFVQTRQFLGCGDGEEGVLSKVYEEKLVLGYSPEQLFDVVAAVDFYHGFVPWCQKSEIIKHYPDGSFDAELEIGFKFLVESYVSHVELERPKRIKTTVSQSTLFDHLINIWEFSPGPVPRSCNVYFLVDFKFQSPLYRQVASMFFKEVASRMVGSFTERCRLIYGPEVPILENSYGERPQSYPSRRN 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0856 261 Pfam Polyketide cyclase / dehydrase and lipid transport 104 230 IPR005031 -
Lele04g0856 261 PANTHER SPERM PROTEIN HOMOLOG 75 249 IPR044996 GO:0006744|GO:0045333|GO:0048039
Lele04g0856 261 SUPERFAMILY Bet v1-like 97 239 - -
Lele04g0856 261 CDD COQ10p_like 97 235 IPR044996 GO:0006744|GO:0045333|GO:0048039
Lele04g0856 261 Gene3D - 95 239 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0856 Lele-ChrLele04 5242145 5244240 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0856 04 5242145 5244240 Lele04g0856 04 5242145 5244240 ECH
Lele01g0859 01 4964439 4966654 Lele04g0856 04 5242145 5244240 hybridization
Lele02g0839 02 5108113 5110246 Lele04g0856 04 5242145 5244240 hybridization