Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0793 ATGGATTTGTCAGCTTCACAGTGCCATAGTGCGAGTGAATCCGGTTGGACCAATTACATAGACCAAACCTCTCGTTTTGAAAAATATTTTCTCAGACGTGGGAGTGTGGAATATGAGGGAAAAGGAGCAAGGCTGAAGGAAGAGGAGGAGGAGGAAGGTTTGTCCATGGTGTCTGATGCTTCTTCCGGGCCTCCACATTATCTTGACGAGGTTGATAAATACTCTGGTCATTCTTCTACTTCCCTACCCAAGAAGGTGGTCAAAGAATGTGGCCGAAGAACTCTACCACAGGCTTCACATCTTGATGACACTGCCAGTTCCCCTGTTTACAGTTTTCCCCTGGCAAGTCTTAAGAAAGTCAGTTTCTCAGGGAAAGGTGAGGCGGAGAATGCAGTGGCTCTCTCTCAAGGTTTCTCTGCTACAAGATTAAAGGCAAAGCCTAAATTCCAGAAGCACTACAATTTCTTAGAATGCTCAAATGCTGGCAAACAATCCTCAGAAGATCAAGGTGATTCCGAACAGAAAGATGAAATTCAAACGCCAGTGTCCATGGGACATGTGGGTGTTCTTCAACGTCTGTTTGGTAGCAACCTATATGCAAACATTGAATTAGAATTTACAAAGTCCAAGAATTTCCCGGCTGTCAGCAAGCAGTCAGAAGGGAGAGGCAGAGAGAGGCATTGTGAGTCAAATCTCTGCTGCGTTTCAAATCTGTATGTAAGAGGCTTCGTGCTTGTAGATCCTGATTATGAATTAGCTGTGTGGAATCCATCAACTGGCTTGTACAAGCGAGTGTCTGGGCCGTCAGAATATTTCCCTTACTTTAAAAGCCTCGGCTATGACGCCTCCGATGATGACTACTTGGTAGTTGTCGGAGCGTGTGATCCAACCGTTGCTGACTACGAATACGATTTCCAGTTTTTCTCCATGCAAGCCTATTCGTGGAAAAGAATTGAGGGTACCCATAATTTTCCCTATAAGAATCCCACGTCTGACCCTAGAACAGGGTTGTTCTTGAATCAAGCTATTCATTGGCTGGCCCTTCGCAAGGATACCAAGGTTGAATTGATTCTTGCCTTTAGTGTAACACAGAAGAAGTTAATTGAAATTCCTCTGCCTGATGATTTCTTTGAAGCCCTGAAATTTGTTTATCTGGGGAAACTGGGAGGATGTCTCAGTCTATCTATTCTTGGGGATCACGAAGTTGAACATGAAATATGGTTGATGAAGGAATATGGAATGAAGTCATCTTGGACTAAATTCATTGTTGTATCAGTTGAGATTCCTGGTGACTACTTCTTCCCAATATGCTTGACCAAAAGTGGTGGAATTGTTGGATCACATTATTCAGATGGTGGCAAAGCGTTGGTGAAATGCAACGACGAAGGCAAAGTACTAGAGTACTGTGAATACAATGATCGAATGCATCAGAATAACGTCATTGTATACACAGAGAGTTTATTTTTAACTCCCTAG 1476 0.4322 MDLSASQCHSASESGWTNYIDQTSRFEKYFLRRGSVEYEGKGARLKEEEEEEGLSMVSDASSGPPHYLDEVDKYSGHSSTSLPKKVVKECGRRTLPQASHLDDTASSPVYSFPLASLKKVSFSGKGEAENAVALSQGFSATRLKAKPKFQKHYNFLECSNAGKQSSEDQGDSEQKDEIQTPVSMGHVGVLQRLFGSNLYANIELEFTKSKNFPAVSKQSEGRGRERHCESNLCCVSNLYVRGFVLVDPDYELAVWNPSTGLYKRVSGPSEYFPYFKSLGYDASDDDYLVVVGACDPTVADYEYDFQFFSMQAYSWKRIEGTHNFPYKNPTSDPRTGLFLNQAIHWLALRKDTKVELILAFSVTQKKLIEIPLPDDFFEALKFVYLGKLGGCLSLSILGDHEVEHEIWLMKEYGMKSSWTKFIVVSVEIPGDYFFPICLTKSGGIVGSHYSDGGKALVKCNDEGKVLEYCEYNDRMHQNNVIVYTESLFLTP 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0793 491 Pfam F-box associated 336 461 IPR006527 -
Lele04g0793 491 TIGRFAM F_box_assoc_1: F-box protein interaction domain 239 444 IPR017451 -
Lele04g0793 491 PANTHER OS02G0783600 PROTEIN 155 427 - -
Lele04g0793 491 MobiDBLite consensus disorder prediction 161 180 - -
Lele04g0793 491 MobiDBLite consensus disorder prediction 40 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0793 Lele-ChrLele04 4868127 4872463 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0811 28 5214822 5219952 Lele04g0793 04 4868127 4872463 CCT
Lele01g0801 01 4653292 4654481 Lele04g0793 04 4868127 4872463 hybridization
Lele02g0774 02 4742347 4743181 Lele04g0793 04 4868127 4872463 hybridization