Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0715 ATGGGTGGTGGTAGAGTAGAAGTTGTGAGTAGCAAGGGATGCTCTGGACTGTTTTCACCTTCATTGCCTTTATTCAAGGGTTTGAATCTGCAACCTTTGGAGTCGATGACTCCTGTCTCATCTTTTAACGGTTCTGAACCAGTGGAAGGGCGATTAAGTGCTCCTTTTGCTGGTCTCGTTATATGCGTAACCGGTCTATCTAAAGAAGCAAGGAAACAGGTCATGGAAGCGACGGAGAGATTAGGTGGCCAATATAGCCCCCATTTGCATCCTCAATGTACCCATTTGGTGGTTCAGATATCCTTTGTTATTCTGAGGTTGAGTGAATCACTTTACAGCCTGAAGAATTATGGCAATAACAATACGAACTTGGATGATTATAAACTGCTTTCCGGGTATACGAATGCTGAAAATTCTTGTCTTCCTGTAAGTTTTCACGAAACCAAGCAAAATGATAGAGCTGAAGAATTTCAAAGATTTTCTGGTCGTGAGTCTAGGAAGAATGTGGATTTGCCTTTATCTGGTTGCTCTATATATGTCGATCCAGACATCTCACCCGAATTGCGAACGAAGGTTATTGATACTGCTTCCAGAGAAGGTGCCAGTTTGATGGAACAGTTTTTTGTTGGTTGTAATGCCAGTCATGTAGTCACTGAAGGTGCATCGATTCAAAGATATCTCGGATATTCTATTAACTTTGTTACACCACTGTGGATTTTAAAAGCAGCCAAGGACAAACAAGTGCAAAGGCTTGTTCATATGTCTTCCGATTTGGCGAGGCAAGTGGGTTTGATGCTTGAGGACATTCATAATGGCATTACAGGGGAGGAACCACTTAAGCAAAATCTCCCTGAAGATCTTCAGAGCGTTAAAAGTAAAGGAAGTTACAAAGAAAGGCAGCAAATTGTGAACTCTGCAAAAATAGGTGTCAGAAATCGCCGTGGTCGTCGAATGCAGGCAAGTTTTTTCATTGCTTGTTCCTTTCTTAGGGATTCTGGCTTCTTTTTAATAACATTTGAGTTTCCCTTCTTCCAGACTTGTCAGACTCCTGTGCGTCCTATAACACCTACCAACCTTCTGGATTCTATCTGCTGGTCAATATCTGAACCAACTTCAACAGCTTCCATTTACACTGACTCTTTCAGTAGTGAAGATCCTAGTGAAAATCATTTGTCAACCTTCTGTGATGCAAAGAGGGCCGTCAAAGATTTAGAACCTTCATTTTCAAACTCTACTCGACCTCTAAAAGAAAGTGAGAAATCTGAACTGATATTTAAAAACCATTTTCTTACCATTCTCTTTCCAATTGATCGATTTGCTGAGATGGGTCCTTCGTCGAGAACATTTTTCAGCCACAACGGGTTTACATGCCTACAGGTGTTGGATCATATATATGCATTTTATCAGGAGAATCTGTTGGCCCATGAAATAGAAGCTGCGATTCATACAGATTCAAGACATGCTGATAGGCTGCGATCAGTGTTCTCGAGTGAAGAAACAGCAGAACGTGGGTTTTTGATGTTCAAGAGGATTGATTTCTTGGGCAGTCGTACGAGTTTTGAAATGTTGAAACGTGTGACTGGGGACAATAACAATAATGTCTACGAACTATTACTCAGGGCCTAA 1626 0.4121 MGGGRVEVVSSKGCSGLFSPSLPLFKGLNLQPLESMTPVSSFNGSEPVEGRLSAPFAGLVICVTGLSKEARKQVMEATERLGGQYSPHLHPQCTHLVVQISFVILRLSESLYSLKNYGNNNTNLDDYKLLSGYTNAENSCLPVSFHETKQNDRAEEFQRFSGRESRKNVDLPLSGCSIYVDPDISPELRTKVIDTASREGASLMEQFFVGCNASHVVTEGASIQRYLGYSINFVTPLWILKAAKDKQVQRLVHMSSDLARQVGLMLEDIHNGITGEEPLKQNLPEDLQSVKSKGSYKERQQIVNSAKIGVRNRRGRRMQASFFIACSFLRDSGFFLITFEFPFFQTCQTPVRPITPTNLLDSICWSISEPTSTASIYTDSFSSEDPSENHLSTFCDAKRAVKDLEPSFSNSTRPLKESEKSELIFKNHFLTILFPIDRFAEMGPSSRTFFSHNGFTCLQVLDHIYAFYQENLLAHEIEAAIHTDSRHADRLRSVFSSEETAERGFLMFKRIDFLGSRTSFEMLKRVTGDNNNNVYELLLRA 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0715 541 Pfam Family of unknown function (DUF6699) 364 525 IPR046522 -
Lele04g0715 541 SUPERFAMILY BRCT domain 53 99 IPR036420 -
Lele04g0715 541 Gene3D BRCT domain 54 127 IPR036420 -
Lele04g0715 541 ProSiteProfiles BRCT domain profile. 51 98 IPR001357 -
Lele04g0715 541 CDD BRCT_TopBP1_rpt2_like 55 99 - -
Lele04g0715 541 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 345 541 - -
Lele04g0715 541 Pfam twin BRCT domain 59 99 IPR001357 -
Lele04g0715 541 ProSiteProfiles BRCT domain profile. 168 248 IPR001357 -
Lele04g0715 541 SMART BRCT_7 53 117 IPR001357 -
Lele04g0715 541 SMART BRCT_7 170 246 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0715 Lele-ChrLele04 4345395 4349120 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0715 04 4345395 4349120 Lele04g0715 04 4345395 4349120 ECH
Lele01g0714 01 4192631 4196363 Lele04g0715 04 4345395 4349120 hybridization
Lele02g0699 02 4204150 4208615 Lele04g0715 04 4345395 4349120 hybridization