Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0645 ATGACAGGTCTATTCTGTGATCTTGCTCCTATCTTTCTCCTTCTAGTGGAGGAGGTGAAAATTACTGATCAATCAGAGCAATTAAGAACATCAAAGGGTCCTGTCAAGACCAAGGCCGTGAAGCTGGCTAATCCTAAAGGTGATCATACAAGTGGGGTGAAGAAAAGCAAGGATAGAAAGGATGAGGAGGCTCAACCCGCTGTGTTAAATGGCTCTTTGACTTTGAAATCTCAGCAGCCTATTAAAAGCAGATCATTCAATGACCGCAAGACTCAAATTTCCAAGCACTCAGAGAAGTCTGATGCGGCATCCTCAGGTTCATTCACAGAGAATAATAAACCAAAAGCATTGAAGAAAGGAACTCTTGATAAAGTACAAGGAGAAGCACAATCTTCTTCAAATATCACTGCAGAAGACGCCAAACCTCCCAAGGTGGGGATGCTTCCAAATTATGGATTTAGTTTCAAGTGTGGTGAACGAGCTGAGAGAAGAAAAGAGTTCTACTCTAAGCTTGAGGAAAAGATTCATGCAAAGGAAGTGGAGAAGAGTAACTTGCAAGCAAAAACCAAGGAGACCCAAGAAGCTGAAATTAAGATGCTCAGGAAGAGTCTAGGATTTAAAGCGACTCCAATGCCGAGCTTTTACCAGGAGCCTCCTCCTCCAAAGGTGGAGTTAAAGAAGATGCCAACTACAAGAGCAAAATCTCCTAAGCTTGGACGAAGGAAGAATTCAACCGGATCCGAGTTAGATGGAAGTCCTAGCAGCAGTGCTCAATTGGGGCTAAGTCTGGATGAGAAAGTGTCTAAGAGTAACCCCAGTATGAGTCATGCCCATCCAAAGAAGCCGCAACGGAGATCTTTTCCTTTTAAACTGCCTTCTGAAAAGACCAGTTCATCTAAGGCACTGAATGATGAAAAGACCACATCATCGAGTATAACAAATAAAGATACCACCTCGTCTGACACAAGTGAGAAAGAGAAATGTCAAGTGGATGCAGCCAATGAAGAGAATGGTGCCTTGTCATGTAATACAAGCGAAGCTCCTTCGCTGAATATAGATCAAAATGCTGCTCTCTCAAACGAGCCAATTGAAACAGAGCCTCAAGTGAATGGTGACATTGTGGTTGAAAAGCAACCTCAGCTCACATTGGTGGAGGAACCGGTGGCGGCAGAGTATCAAGTGAACAGCAGGGACATAAACATGTGTTAA 1209 0.4342 MTGLFCDLAPIFLLLVEEVKITDQSEQLRTSKGPVKTKAVKLANPKGDHTSGVKKSKDRKDEEAQPAVLNGSLTLKSQQPIKSRSFNDRKTQISKHSEKSDAASSGSFTENNKPKALKKGTLDKVQGEAQSSSNITAEDAKPPKVGMLPNYGFSFKCGERAERRKEFYSKLEEKIHAKEVEKSNLQAKTKETQEAEIKMLRKSLGFKATPMPSFYQEPPPPKVELKKMPTTRAKSPKLGRRKNSTGSELDGSPSSSAQLGLSLDEKVSKSNPSMSHAHPKKPQRRSFPFKLPSEKTSSSKALNDEKTTSSSITNKDTTSSDTSEKEKCQVDAANEENGALSCNTSEAPSLNIDQNAALSNEPIETEPQVNGDIVVEKQPQLTLVEEPVAAEYQVNSRDINMC 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0645 402 MobiDBLite consensus disorder prediction 98 114 - -
Lele04g0645 402 PANTHER PROTEIN WVD2-LIKE 4 24 337 IPR044833 GO:0008017
Lele04g0645 402 Pfam Targeting protein for Xklp2 (TPX2) domain 153 223 IPR027329 -
Lele04g0645 402 MobiDBLite consensus disorder prediction 201 332 - -
Lele04g0645 402 MobiDBLite consensus disorder prediction 24 150 - -
Lele04g0645 402 Coils Coil 168 188 - -
Lele04g0645 402 MobiDBLite consensus disorder prediction 240 277 - -
Lele04g0645 402 MobiDBLite consensus disorder prediction 70 87 - -
Lele04g0645 402 MobiDBLite consensus disorder prediction 290 318 - -
Lele04g0645 402 MobiDBLite consensus disorder prediction 48 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0645 Lele-ChrLele04 3885997 3889433 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0645 04 3885997 3889433 Lele04g0645 04 3885997 3889433 ECH
Lele01g0639 01 3742104 3745546 Lele04g0645 04 3885997 3889433 hybridization
Lele02g0626 02 3743753 3750819 Lele04g0645 04 3885997 3889433 hybridization