Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0551 ATGAAGTTTCAAATCTTTCCCATCTTTGGTTTTCTCGCTCTTGTGATAGTGGCAACTCATGCTGCTTTCACTCCTGAACTCTACTGGTTGTCCAAGCTTCCCACTACGCCAATGCCAAAGGCCATCACTAATCTCTTACATCCTGAGTGGAAGGAAGACAAAAGCACGTCGGTGGATGTAGGGAATGGTGGAGTGACCGTTGATGCAGGAAAGGCAGAAGGTGGTGGGACCAATGTGGATGTTGGAAAAGGAGGAGTTGCAGTAAATGCTGGACACAAGGGAAAGCCTCCTGTATATGTTAACGTTGGGCAACCATTTCAGTACCTTTATGCTGCCACTGAGACTCAATTGCATCATGATCCAAACGCAGCCTTATTCTTCTTGGAGAAGGACATGTATCCTGGCAAAGAACTGAACTTACATTTCACCAAGACCACACAAAATACAGTCAAACTCTTGCCTCAACAAGTTGCTAAAACAATACCCTTTTCATCAAGCAAAATCCCAGAAATATTCAGCAAGCTTTCTGTCAAACCTGGCTCCTTGAAGGCTCAGAATATGAAGAACACCATAAAGGAATGTGAAGAGCCAGGAATCAGAGGTGAGGAAAAGTACTGTGCCACTTCCATGGAATCCATGGTGGAATTCACAACTTCAAAGCTTGGGAAGAATTTGTGGGCCCTATCTACAGAGGTTGATGACAAGGGGACCCACATGCAGAAATACATAATGACAGTTGGAGTGAGGAAGATGAGAGGGCTAAAGGCCATTGTGTGCCATTTAACAAAGTACCCATATGCTGTGTTTTACTGTCACAAAACAGAAACCACAAGAGCTTATTATGTGCCTCTTGAGGGTGAAAATGGTGGAAGCAAAGTGAAAGCAGTGGCAATCTGCCACACAGACACATCACAATGGAACCCAAAGCATTTGGCCTTCAAAGTGCTGAAGGTTAAGCCAGGAACTGTTCCAGTTTGCCACTTCCTTCCTGAGGATCATCTTGTTCTTGCTCTTTCATTGCAAATCTACGGTGGCTCCATTTCTCAACATGTTAAGAATTTTCCTGTTGTCCTGAAGAACAACCTTGCCTTAGGAGTAAGTGCCATGATCGCAGTCTATGAACTTAATCGGGTCTCAAAGGCTCTAAAGATCCCCATGTTCTCCCAACCATAA 1173 0.4433 MKFQIFPIFGFLALVIVATHAAFTPELYWLSKLPTTPMPKAITNLLHPEWKEDKSTSVDVGNGGVTVDAGKAEGGGTNVDVGKGGVAVNAGHKGKPPVYVNVGQPFQYLYAATETQLHHDPNAALFFLEKDMYPGKELNLHFTKTTQNTVKLLPQQVAKTIPFSSSKIPEIFSKLSVKPGSLKAQNMKNTIKECEEPGIRGEEKYCATSMESMVEFTTSKLGKNLWALSTEVDDKGTHMQKYIMTVGVRKMRGLKAIVCHLTKYPYAVFYCHKTETTRAYYVPLEGENGGSKVKAVAICHTDTSQWNPKHLAFKVLKVKPGTVPVCHFLPEDHLVLALSLQIYGGSISQHVKNFPVVLKNNLALGVSAMIAVYELNRVSKALKIPMFSQP 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0551 390 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 16 335 IPR044816 -
Lele04g0551 390 Pfam BURP domain 125 336 IPR004873 -
Lele04g0551 390 ProSiteProfiles BURP domain profile. 126 339 IPR004873 -
Lele04g0551 390 SMART BURP_2 124 339 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0551 Lele-ChrLele04 3346455 3349148 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0551 04 3346455 3349148 Lele04g0551 04 3346455 3349148 ECH
Lele01g0537 01 3217613 3221751 Lele04g0551 04 3346455 3349148 hybridization
Lele02g0532 02 3211894 3214911 Lele04g0551 04 3346455 3349148 hybridization