Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0542 ATGGCTTCCCACGAATACGATGATGCGCGTGCCGGATACGACGACCACCGACAGCCACCATCACAATCTCAAGATCTGGGCTATGATCCGAATTTCGTACCCGATTCTGTGAAGTCATTTGTTGTCCACCTCTACCGCTACATCCGAGAGAAAAATGTGTACGAGATCCACCAGATGTACGAGAGCTCTTTCCAAACTCTCTCGGAGCGTCTCTTCAAGGATACTCCGTGGCCTTCTGTGGACGCTGTCGCTAACTACGTTGACAATGATCATGTGTTTTGCCTCCTGTACCGCGAGATGTGGTTTCGTCACCTCTATGCTAGGCTCACGCCAACCCTTAAGCAGAGGATAGATTCCTGGGACAATTATTGCAGCCTCTTTCAGGTTGTATTGCATGGAGTTGTCAATATGCAGCTACCCAACCAGTGGTTATGGGATATGGTGGATGAGTTTGTCTACCAGTTTCAGAGCTTCTGCCAGTATAGAGCCAAGATGAAGAACAAAACCGAGCAGGAAATTGCGATTTTGAGGCAGTATGATCAGGCAACAGATAGGAAGTTCCTTACTTACAATAAATTCATCACGAAACAATTCGAGTTATCTGAGCTATTGTTCGCCCGTGCTGGTTGCCTAACAGCTTGGAACGTGTATGGTGTCCTCAACTTCTTGCAAGCTCTTGTCGAGAAGTCCATGATTATTCAGATTCTTGAGCAAGAAAAAGAAGGCCTGGAACAGTTTACTGCCACTGATGGGTATGATTACAACGGAGGGAGTAATGTCTTAAAGGTGTTGGGGTATTTCAGCATGGTAGGATTGCTGCGAGTTCATTGTCTTTTAGGTGATTATCATACAGGTCTCAAATGCTTGCTTCCTATTGATATTAGTCAACAAGGCGTTTACACCAGTGTTATTGGAAGCCACATTACCACCATATATCATTATGGTTTTGCCAATCTTATGTTGAGGAGGTATGTGGAAGCAATTCGTGAATTTAACAAAATTCTTTTGTATATCTATAAGACAAAACAGTATCATCAGACATCCATACAGTATGAACAGATACTGAAGAAGAATGAGCAAATGTATGCCTTGCTGGCTATTTGCCTGTCGCTCTGCCCCCAAAACAGGCTTGTTGATGAAACTGTGAACTCTCAGTTGCGGGAGAAGTATGGTGAAAAGATGATTAGAATGCAAAGATATGACGAGGAGGCTTTTGCTATCTATGATGAGCTCTTTTCATATGCATGTCCCAAATTCATTACCCCATCAGCACCCAGTTTTGAGGAGCCTTTAGTTAATTACAACCAGGTTAGTGATTACCTTCCATTTACAATTATAAAAGGTGGAACCAAAACCGTGTCGGATGCCTACAGACTTCAGTTGAAACTATTCCTTTATGAAGTGAAGCAGCAACAATTGTTATCAGGTGTCCGGACCTTCTTGAAAGTCTATTCAACAATCTCTCTTGCGAAACTTGCTAGCTACATGGAAGTAGACGAAGCCAATTTAAGGACTATTTTGATGACGTACAAGCATAAAACTCATGCCGTTGATAATGATGGAAAAGTTATATCCAATGCTGATGTGGACTTCTACATTGATGATGATATGGTTCACGTTGTGGAGTCTAAGCCCCCTAAGCGATATGGGGATTACTTCTTGCGTCAGATAGTCAAGCTTGAAGGCGTTATCAATGAGATAGACGGTATAAAGCTGGAATAA 1722 0.4274 MASHEYDDARAGYDDHRQPPSQSQDLGYDPNFVPDSVKSFVVHLYRYIREKNVYEIHQMYESSFQTLSERLFKDTPWPSVDAVANYVDNDHVFCLLYREMWFRHLYARLTPTLKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIAILRQYDQATDRKFLTYNKFITKQFELSELLFARAGCLTAWNVYGVLNFLQALVEKSMIIQILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQQGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIYKTKQYHQTSIQYEQILKKNEQMYALLAICLSLCPQNRLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDELFSYACPKFITPSAPSFEEPLVNYNQVSDYLPFTIIKGGTKTVSDAYRLQLKLFLYEVKQQQLLSGVRTFLKVYSTISLAKLASYMEVDEANLRTILMTYKHKTHAVDNDGKVISNADVDFYIDDDMVHVVESKPPKRYGDYFLRQIVKLEGVINEIDGIKLE 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0542 573 MobiDBLite consensus disorder prediction 1 29 - -
Lele04g0542 573 Pfam RNA polymerase I-associated factor PAF67 115 559 IPR019382 GO:0003743|GO:0005737|GO:0005852
Lele04g0542 573 ProSiteProfiles PCI domain profile. 330 547 IPR000717 -
Lele04g0542 573 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 211 570 IPR019382 GO:0003743|GO:0005737|GO:0005852
Lele04g0542 573 MobiDBLite consensus disorder prediction 1 15 - -
Lele04g0542 573 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 22 562 IPR019382 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0542 Lele-ChrLele04 3282872 3286821 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0542 04 3282872 3286821 Lele04g0542 04 3282872 3286821 ECH
Lele01g0531 01 3177936 3181857 Lele04g0542 04 3282872 3286821 hybridization
Lele02g0522 02 3151983 3155661 Lele04g0542 04 3282872 3286821 hybridization