LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele04g0502	ATGCGGGTATATTTCAAGTCAGATGATGTGCATGCGTGCATTGTTACATGCGATGGTCTTTGCCCTGGACTCAACACAGCGATAAGGGAAACAGTCCGTGGTCTATCTCACATGTACGGTGTCAACAAAATCCTTCGTATAGATGAACTTAAATATATGTGCTTTGAGCTTGATCTATTAGGGGGGTTACAGAGGTTTCTACTCCAAGAACACCATTACTTTAACACCCAAGGAGATGGAACCCAAAGAGGAGCCGCTGTGATTTATGAGGTTATTGACAAGTCCTTTGGTTTTGATACTGCTGTTGAGGAGGCTCAACGTGCCATTAATGCAGCACATGTTGAGGCTGAAAGTATTGAGAATGGGATTGGTGTTGTAAAGCTGATGGGACGCTACAGCGGTTTCATTGCAATGTATTCTACTCTTGCTAGTAGAGATGTGGACTGTTGCTTGATTCCAGAGTCACCCTTCTACCTTGAGGGAAAGGGTGGACTTTTTGAATTTATTGAGAAAAGACTAAAAGAAAATGGACATATGGCCATAGTCATAGCTGAGGGAGCAGGACAAGATCTTACAGAAAGTATGCAGGCTGCAAACCAGAAGGATGCTTCTGGAAACAAACTGCTTCGAGATAGGATTAAGCTGGATAACAACATTAAACTTGGTGGCATTGTCACTGGGTTTGGGAAAAAAGATATTCAAACTCAATGGCACTCTTTCGCCGTCTTCACCTCCTCACCACCATGTCCGATCAAACAATATCAGTGCCCTATGCCCCCTCTAATTAAGACGGCTCTCCTCGTAGTCCTTCCTCACCTCCACGCCAAACGTTCTTTTCAGTCCGATCCTAGTCCCTGCCGGTTTAGGCTTATTCCTCCTAGCTGCTGGTTTTCTGTTTGCCGGTGGATGTGGTGTAGCGGCTATATAGCTGCATTGTCGTGGATATGTAATTACGTCGCCGGGAAGAACCCGCTGGGATCCGATCGGCTTGACTACGCCGGAGCCATAATCGCAGATAAGGCCAGGGACATGCATGAAGGAAAGAGCCAAGGATTATGGGAAGTACGCGCAGGGGCCATGGCCATTATATTTGTAGGTCCCACAAAACCATCTGGGAAAACTAATTCTTTAATGAAAGTAGGCTCAGAGAGGCAACCAAGCACAATGGTTATTTGGGTAATGAGGTTTAACAAACCAACTGGTTGTCAAAAACTCGAGTTAACTCTCCGATTCAAGCGGTTCTCTATTGCTGCTATCAATGATACGGACTCCAGAAGTCGGTGGGAACCACTTGCTCCAACGAAGGAAGCACAGGAATTTCATCTGTCTCAAACTTATCATGAAGGACTTCTTAAGTTACAATCAAAAGAATATGAAAAGGCTCGGGAGCTTTTAGAATCTGTTCTCAAAGATCCTCTTATAGCTAATGCGCAAGTGGATAGAAGTGCCAGTGATGGCCATCTGTTGCAACTCAGATTTTTGGCATTGAAGAACCTAGCCTCCGTTTCTCTTCAGCAAGGTTCCTCTCATTATGAGAATGCATTGCATTGTTATCTTCAAGCTGTGGAGATCGACTCTAAAGACTCTGTTGTCTGGAACCAACTGGGAACCTTGTCATGCTCAATGGGTCTATGGAGTATTTCACGGTGGGCATTTGAGCAAGGCCTTGTATGTAGTCCTAATAACTGGAATTGCATGGAAAAACTTTTGGAAGTTCTTATCGCTATTGGCGATGAGGTTGCATGCCTCTCTGTTGCAGAATTAATTCTGAGGCATTGGCCATCACATTCTCGTGCTTTGTATGTTAAAAATACCATTAAAGAGTCAGAACCATTGCCATTTGCTCCCAGAGGCATAGACAAGCTGCAACCTAAACATGTACGGCTTAAATTTCCTGAAAAGAGAAAAGCTACTAATGAAAATCTGGATGAGGTCGATGCATTTAAGAAACGGAACCAGAACATTGAAATTCACTTAACAGAAGCTTCCTGGGTGGCTCTTGCTGATGCACTTCTGGAAATCTTATTTCCATTTAATGTTCAAAGTTCTTTGACAGAGCCCGAAAACGCAAGCAAGTGTATGGACATCAGATTGAGCATATCTATATCCTGTTCAGAAAGTGTTATGAACTCTGTGATAGGGAAAGGGACTAGTGGTGACAATATTGCTTTTGGTGATGGTAACATAGAAAGCTCAAGTGCCTTTAAAGGAAAAGAAGCAAATTCCCAAGAAGAACAACCACATGAGAGGCGAAGTTCTCGTTTGGAAAGGCTCAGGAGCCGTAAACCAGGGAAAGAAGAATCAGATTCTTCATGTGGCAAGGACCATGCCAGGTTTGTCAGTAAATATCTAGAGTCTTTTGTTGCTGGTGAATTGGGTGGTAGAGATTCTCTTGATACCACTACATCATCCAACATAGTAAATACTGAATCTAATGAAGTTTCTAGATTTGTAAGAGAAACCTCAAAAAACTATGGTGCTTACCATGTCGGGCACTTGCTTTTAGAGAAGATTGCAAGACAAAGCCTTACTTATCAAGATGCTTTTGTCAAATTCCTGGAGCTGGAGAAATTGACAAGGCACTGGGGAAAGGAAAGAACTGCTGAATGTAGTCTTTTTCTTTCGGAGCTGTATTATGACTTGGGGTTGTGCTCTCCCTGTGGTTCTGATCAATCAAAGTTTATGTCAGACTCATCTTATCATCTCTGTAAGATCATAGAGTCTGTTGCTCTAGATTATCCTCTTCACTTGTCTTATGACTTGAATAATGAAGGTTGTCCCTTGGGAACCATTGCCTCTGCTGAGGATAATTCAGACAGCTCACTTCTTATGAAAAACAATTCTTTTTGGGTTCGATTCTTCTGGTTGAGCGGGAGATTGTCTAATTTTGATGCCAACAAGGCAAAAGCTTGTGAAGAATTATGCACTTGTTTGTCACTTTTGGCAAAGAAGCAAAATTTGAATGATTCCCTATGTTCAGTCTTCCGCTCCCATTGCAAAGTTATAAAAGAGCTAAGCATTGACAGAGTTCTTTATGAAATTAATATATTAAAGGTCAATTTCTTGATGGAAAAGTCTGTCAATAAGATGTTTGAGAAAGAGATGTATTCAGAGTGTGTATCCGTGCTTTCTCCGCTTCTGTTCTCTACACAGGATGTCTACATTGATTCATTATCTTTAACCAAAGCAGATAAAAAAGATGAAACAATAACCTCGGTTGAACTCATAGCTCTAGATGTTTTAATTGAAGCATGCCAGAAGACAAAACCAATGGATGTGGAGCTCTATTTGAATTGTCATCACAGAAAGCTTCAGATACTGATGGCTATTGTGGGGTTGAATATGTGTACCACATCATTTAAACCTTCCCATCAAACTCAGGGTATTAGTACTTCTCCTAATATCGATACTGATTCAAAGGAAGGTTCAGGTAAGCACTGTAGTCAATTGGTGGCCGAGGAAGTGAAAGCACTCTCTGACTCTGTCTCAAAAGTGAAGAAAGTTATTGATCAATGTAGAGATTCTAATGGCCTTAATGGTCCAATAAGCAGCATTTGCCAAATTCAATCTCTGCTCTTGTCAGTCATGAGCTACTTTGCGAACATTCTTGTCTGCGACAAAGCCTCTGGTCTGGTGACTTCTGACCAAGCAGAAAGCAGCTGTTTTGTCGACGCAGCCATTGATTTTTGTAAACTCCAGCATTTTCACCCAAATATACCTATTAAAACTCAGGTGAACTATTTCTTTCTACGAAGTGTTGATTTAATTGTGGCAACACATGACTTGCTTGCTGAGTATGGGCTTTGCTGTGTGGGTGAAGGTGGCAAAAGTGAGGAAGGAACATTTCTTAGATTTGCAATAAAGCATCTATTGACCTTGGATATGAGGCTTAAATCGAGCTTTAACACTGTAAAGAAAGAACCAATGCAATGGGATGAGAAGGCATCCCAAAACAATCTTGTTAATGTGTCTTTTGAAGAATCGAAGACTTATACATTAGATCTTCAGACGGATTGTGCCAAAATAGGTGAAATAGGTTCTGAGCAGAAGGATGATCAGGAAGGAATAATATCCAGGGGAATTTCATCCCACAAAGTCCATGATAAAGACGGTAAGAAGGTAGAGGATGACAATCTTGGAGATGCAGGGTCTGACAGAAAGTTAAGCAAAGGTGAAGTGGTAAGCAATACTTTGATTGCATGTGGCAACGATCTTACTGAAGATGAGAGGGAAGAACTTGAGTCAAAAATTGACAGTGCCTTAGATCAGTGCTTTTTCTGCTTATATGGGTTAAACCTACGATCTGATTCATCTTATGAAGATGATATAGTGATGCACAGAAATACAAGCCGGGGAGACTATCAGACTAAAGAACAGTGTGCTGATGTTTTCAAGTATGTTCTTCCCTATGCAAAGGCATCGTCTAGAACCGGATTAGTGAAGCTTCGGAGAGTTCTGAGAGCTATTAGGAAGCACTTCCTGCTGCCACCAGAAGATGTCTTGGCTGGAAACCCCATAGATAAGTTCTTAGATGATTCTGATCTGTGTGAAGATAAACTCTTAGATGAGGCTGGGTCAAATGGATTCCTGGAAACTATTACTAAGATTATTTTTCCTGATGTGGGAGGCCTCACACAGTATAACACATTATTATGTGGGAGGTCCGAGCCGTATTTGGAGGTATATCATAACTTGTATTATTTCCTTGGTCTGTCTGAGGAAATGAGTGCAACAGATAAATGGCCTGGCTTTGTGCTGACCAAGGAAGGGGAAGAATTCGTTGAACAAAATTCCAACCTCTTCAAATATGATTTAATGTATAATCCTCTCCGCTTTGAAAGTTGGCAGCGTCTTGCAAATATTTACGATGAGGAAGTAGATTTGCTGCTAAATGATGGTAGCAAACACATTAATGTAGCAGGATGGAGGAAGAGTACTTCTTTACCCCAAAGAGTGGAAACAAGCCGAAGGAGGAGTAGACGGTGTCTTCTAATGAGCTTAGCTCTGGCAAAGACATCTGATCAGCAGTGTGAAATACATGAGTTATTGGCGTTGGTATACTATGACAGCCTCCAGAATGTGGTGCCTTTTTATGACCAGAGGTCTGTTTTGCCCTCAAAGGATGGAGCATGGATGATGTTTTGTGAGAACTCAATGAAACATTTTAAGAAAGCCTTTGCACTTAAACAAGATTGGTTGCATGCGTTTTACTTGGGCAAACTTAGTGAAAAACTTGGATATTCACATGAAACCTCATTATCATATTACAACAAAGCTATTTCTTTGAATACGTCAGCTGTAGATCCTGTCTACAGAATGCATGCCTCACGCCTGAAGCTACTCTTTAAGTATGGAAAACAAAATTCGGAGATTCTAAAGGTGCTTTCAGCACACTCCTTTAATCAATCCGCAAAAGAAGCTGTCATTAATATCCTTGGTGAAATGGATGAATCCTTAACAAGTGCAAAGGAAAAATGTGTACAAATCAACTCTGTGGAGATAAAGCATGAAGGACTGCTCAAATTGGATGAGGCATGGTCCATTGTTTACAATGACTGCCTTTCTGCCCTAGAGACTTGTGTGGAGGGGGATCTCAAACATTTCCATAAGGCCAGATACATGCTGGCTCTAGGGATTTATAAAAGGGGTGAGAGTGGTGATATAGAGAGGGCAAAAGATCAACTATCTTTCTGCTTCAAGTCATCGCGTTCTTCCTTTACAATAAATATGTGGGAAATCGATAGCATGGTCAAAAAAGGAAGGCGCAAAACACCCAGTTCTGCTGGGAACAAGAAAGCCCTTGAGGTTAATTTACCAGAAAGTTCACGGAAGTTCATTACTTGCATTCGTAAGTATGTGCTGTTTTATCTCAAACTCCTGGAGGAAACTGTAGATAGATGTACTCTCGAGCGTGCGTATAATTCCCTTCGGGCAGATAAGAGGTTCTCATTATGTCTTGAAGATCTTGTACCTGTGGCCATTGGAAGGTATGTAAAGGCTCTGATTTCAACTATGCATCATTCTCAGACCGCTGGCTCCCGTTCAACAGGCAGTTCTGACCATGTGCTTGAGAGGCTGTTTACTTTGTTCATGGAGCAAGGGAGTTTATGGCCAGAGATATGCTGCTTGCCTGAAATTAAGAGCCCAGATACATCTGAGAGTATTTTATATGGATATCTTCATGATCATATCATGTCATTAGAAGAAAATGGAAGACTGGAAACTCTTGAAGCAATAAATGAGAAAATTCGCAAACGTTTCAAAAACCCAAAGTTGACAAATAGTAATTGTGCAAAAGTTTTCAGGCATGCTTCTGTTGCATGGTGCAGATGTCTTATATATAACTTGTCACAAATCACTCAATTATCAAGTGGGTTCTCAAATGAGAACAAGGCCGTTAATTTGACAGATGGTGGTATGGACTATTGCCAGTATCTCTGTGTTGATCTGCAGACACATGAATTATGGAGTACAGCTTTTGAAGATCCGATTCACCTAGAAAAAATTGAGAAAAAATGGAGCCCCACTTTATCAAAAATCAAGAATACAGTTGTCAAGAAAGCTTTTGATGATAATTTGGAGACTGCGAACACTTTGCTCAGAGCTTCCTACAATTTTTACCGTGAGAGTTCTTCTGTAATTCTTGGCTCTGGCGTCAAGCTTTATCCAATTCCATCTCAATTGGCAACTGAAGCACAGTTCCACCCAAGTATGCATGGGATTGAAGCTCTTGATCTGAGCATCCCAAGGAAGCTTCTCTTGTGGGCTTTTGCACTATTATATGGTCGCTATGCAAATATCTCAGTTGTTGTAAAGCACTGTGAGGAAATTACAAAGGCGAAGGTGAAAAGAGGAAGTGGACTTTCCCCTTCATTTTCAAATTTGGCAGCCGCCACTCCAACTGTTACAGGCAGCGGGAAAGAGGGAGCAAATTCTGCTGGATGCATTGATGTAACTCCCACACATGTGACAACAGCACTTATACAGCATTGTACCCCTAATTCGGTAAGTTTGCGTTCTTCCTCTGATGAGATTCAAAAGAGTCTCTTAAATTCTCCCCAACTGCAACATTGCAACTCCATGGCGGAAAGGAGCAACTCGATGGCACTTGAAGGAGATCCGTAG	7125	0.4142	MRVYFKSDDVHACIVTCDGLCPGLNTAIRETVRGLSHMYGVNKILRIDELKYMCFELDLLGGLQRFLLQEHHYFNTQGDGTQRGAAVIYEVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYSGFIAMYSTLASRDVDCCLIPESPFYLEGKGGLFEFIEKRLKENGHMAIVIAEGAGQDLTESMQAANQKDASGNKLLRDRIKLDNNIKLGGIVTGFGKKDIQTQWHSFAVFTSSPPCPIKQYQCPMPPLIKTALLVVLPHLHAKRSFQSDPSPCRFRLIPPSCWFSVCRWMWCSGYIAALSWICNYVAGKNPLGSDRLDYAGAIIADKARDMHEGKSQGLWEVRAGAMAIIFVGPTKPSGKTNSLMKVGSERQPSTMVIWVMRFNKPTGCQKLELTLRFKRFSIAAINDTDSRSRWEPLAPTKEAQEFHLSQTYHEGLLKLQSKEYEKARELLESVLKDPLIANAQVDRSASDGHLLQLRFLALKNLASVSLQQGSSHYENALHCYLQAVEIDSKDSVVWNQLGTLSCSMGLWSISRWAFEQGLVCSPNNWNCMEKLLEVLIAIGDEVACLSVAELILRHWPSHSRALYVKNTIKESEPLPFAPRGIDKLQPKHVRLKFPEKRKATNENLDEVDAFKKRNQNIEIHLTEASWVALADALLEILFPFNVQSSLTEPENASKCMDIRLSISISCSESVMNSVIGKGTSGDNIAFGDGNIESSSAFKGKEANSQEEQPHERRSSRLERLRSRKPGKEESDSSCGKDHARFVSKYLESFVAGELGGRDSLDTTTSSNIVNTESNEVSRFVRETSKNYGAYHVGHLLLEKIARQSLTYQDAFVKFLELEKLTRHWGKERTAECSLFLSELYYDLGLCSPCGSDQSKFMSDSSYHLCKIIESVALDYPLHLSYDLNNEGCPLGTIASAEDNSDSSLLMKNNSFWVRFFWLSGRLSNFDANKAKACEELCTCLSLLAKKQNLNDSLCSVFRSHCKVIKELSIDRVLYEINILKVNFLMEKSVNKMFEKEMYSECVSVLSPLLFSTQDVYIDSLSLTKADKKDETITSVELIALDVLIEACQKTKPMDVELYLNCHHRKLQILMAIVGLNMCTTSFKPSHQTQGISTSPNIDTDSKEGSGKHCSQLVAEEVKALSDSVSKVKKVIDQCRDSNGLNGPISSICQIQSLLLSVMSYFANILVCDKASGLVTSDQAESSCFVDAAIDFCKLQHFHPNIPIKTQVNYFFLRSVDLIVATHDLLAEYGLCCVGEGGKSEEGTFLRFAIKHLLTLDMRLKSSFNTVKKEPMQWDEKASQNNLVNVSFEESKTYTLDLQTDCAKIGEIGSEQKDDQEGIISRGISSHKVHDKDGKKVEDDNLGDAGSDRKLSKGEVVSNTLIACGNDLTEDEREELESKIDSALDQCFFCLYGLNLRSDSSYEDDIVMHRNTSRGDYQTKEQCADVFKYVLPYAKASSRTGLVKLRRVLRAIRKHFLLPPEDVLAGNPIDKFLDDSDLCEDKLLDEAGSNGFLETITKIIFPDVGGLTQYNTLLCGRSEPYLEVYHNLYYFLGLSEEMSATDKWPGFVLTKEGEEFVEQNSNLFKYDLMYNPLRFESWQRLANIYDEEVDLLLNDGSKHINVAGWRKSTSLPQRVETSRRRSRRCLLMSLALAKTSDQQCEIHELLALVYYDSLQNVVPFYDQRSVLPSKDGAWMMFCENSMKHFKKAFALKQDWLHAFYLGKLSEKLGYSHETSLSYYNKAISLNTSAVDPVYRMHASRLKLLFKYGKQNSEILKVLSAHSFNQSAKEAVINILGEMDESLTSAKEKCVQINSVEIKHEGLLKLDEAWSIVYNDCLSALETCVEGDLKHFHKARYMLALGIYKRGESGDIERAKDQLSFCFKSSRSSFTINMWEIDSMVKKGRRKTPSSAGNKKALEVNLPESSRKFITCIRKYVLFYLKLLEETVDRCTLERAYNSLRADKRFSLCLEDLVPVAIGRYVKALISTMHHSQTAGSRSTGSSDHVLERLFTLFMEQGSLWPEICCLPEIKSPDTSESILYGYLHDHIMSLEENGRLETLEAINEKIRKRFKNPKLTNSNCAKVFRHASVAWCRCLIYNLSQITQLSSGFSNENKAVNLTDGGMDYCQYLCVDLQTHELWSTAFEDPIHLEKIEKKWSPTLSKIKNTVVKKAFDDNLETANTLLRASYNFYRESSSVILGSGVKLYPIPSQLATEAQFHPSMHGIEALDLSIPRKLLLWAFALLYGRYANISVVVKHCEEITKAKVKRGSGLSPSFSNLAAATPTVTGSGKEGANSAGCIDVTPTHVTTALIQHCTPNSVSLRSSSDEIQKSLLNSPQLQHCNSMAERSNSMALEGDP	2374

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele04g0502	2374	Gene3D	Phosphofructokinase domain	98	225	IPR035966	GO:0003872\|GO:0006096
	Lele04g0502	2374	Coils	Coil	102	122	-	-
	Lele04g0502	2374	MobiDBLite	consensus disorder prediction	741	773	-	-
	Lele04g0502	2374	MobiDBLite	consensus disorder prediction	1123	1144	-	-
	Lele04g0502	2374	Gene3D	Tetratricopeptide repeat domain	419	605	IPR011990	GO:0005515
	Lele04g0502	2374	Coils	Coil	1403	1423	-	-
	Lele04g0502	2374	Gene3D	-	7	51	-	-
	Lele04g0502	2374	FunFam	Tetratricopeptide repeat (TPR)-like superfamily protein	425	610	-	-
	Lele04g0502	2374	MobiDBLite	consensus disorder prediction	1359	1386	-	-
	Lele04g0502	2374	SUPERFAMILY	Phosphofructokinase	3	211	IPR035966	GO:0003872\|GO:0006096
	Lele04g0502	2374	PANTHER	CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED	414	2366	IPR033053	GO:0006325
	Lele04g0502	2374	MobiDBLite	consensus disorder prediction	1123	1138	-	-
	Lele04g0502	2374	Pfam	Phosphofructokinase	92	191	IPR000023	GO:0003872\|GO:0006096
	Lele04g0502	2374	SUPERFAMILY	TPR-like	445	581	IPR011990	GO:0005515
	Lele04g0502	2374	MobiDBLite	consensus disorder prediction	733	773	-	-
	Lele04g0502	2374	Coils	Coil	451	471	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele04g0502	Lele-ChrLele04	3011839	3031054	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele04g0502	311	350	Lipid Metabolism Gene Families	AT2G25890	51.220	5.32e-06	47.4

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele01g0496	01	2944052	2949002	Lele04g0502	04	3011839	3031054	hybridization
	Lele02g0482	02	2887546	2904844	Lele04g0502	04	3011839	3031054	hybridization