Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0340 ATGGCGGGCGGTGGAAAGGTCTCCTTCAAAGTTACCCTCACCTCCGATCCTAAGTTACCCTTCAAAGTATTTAGCGTTCCAGAGGCTGCCCCTTTTACTGCCGTCCTTAAATTCGCAGCTGAAGAATTTAAAGTGCCCCCACAGACCAGCGCAATTATCACCAACGATGGTGTTGGGATAAATCCACAGCAGAGTGCAGGTAATGTTTTCCTCAAGCATGGGTCAGAGTTACGGCTGATTCCGCGGGATAGGGTTGGAGCCTCTGAGACGTTGCTGAAGCTTGCTATGAAATCCAAAAGCTATGCTCACACTGGGAATGGCTATGCAAGTGAGAGTGGTAGCAGCAGCTCTCCCAGCCCACCAAGGTCACCGCCCCGCCAATTATCTACCAACATATCTCATTGCCGCCGACGATTGCGGCCCAAAGCCCTCTCTCACACCACCCACCGTCTAGAGAGCTTTGCCGCAAGTATCATTGCTCGCCGGAATCTCCGCTACTTCTTCCTTCTGCCACTTCTCTACATCTCTGGCTTGCTCATGTGCGTGGGGCCATTCTCTGCCCTCATTGGCCATGCCCCTGTTCCCGGCTCAGTTTATCGTAGTCACGAGATTTTTCAAAAGCTTTGGCCGGATATTCAATCTGATAATTCGTCTGCAGCGGAGTTATCTTCAGTATGGAAGTACAAAAGAAAGTTGAGGGAGAACAAACCTTGTCCAAATATCACTGCAGTGCAACATGAACATTTTGCGTCTTCAGGCCATAGTGGTTTTCTAATTGTGGAGGCTAATGGAGGCCTTAACCAGCAACGTTCTGCAATTTGCAACGCTGTGGCGGTGGCTGGACTCTTGAATGCTATACTAGTTATACCTCACTTTGAATTCCACAACGTCTGGAGAGATCCAAGTGAATTTGGGGATATATATGAAGAAGATCATTTTATATCCACCCTTGAGGGTTATGTGAAGGTGGTTAAAGAACTTCCCGAGGTACTAATGGAGAGATATAATTACAACATCAGCAATATCACTACCATCCGGATCCAAGCTTGGGCTCCTGTCAGTTATTACTTGGGAGTTATTTATCCAATCATGCAAAAGGAAGGGGTCATTCGAATATCTCCATTTGCCAACCGATTGGCAATGAGTGTCCCTCCTCACATTCAATTTTTGAGATGTCTAACTAATTATAAAGCACTGAGGTTTGCTTCTTCAATATCAATACTAGCTAAGAAACTGGTTAACCGAATGATTGAGAAGAGCTCAAGAACAGATGGGAAGTATGTTGCTGTGCATCTACGCTTTGAGGAGGACATGGTGGCATTCTCCTGTTGTATATATGATGGAGGAGAGGTGGAAAGGTTGGAAATGGATTCGGTTCGAGAAAAAGGATGGAAGGGTAAATTTAAGCGAAAAGATCGTGTCATTCTACCTAACCTCAATCGAATTGAAGGGAAATGCCCACTTACCCCCTTGGAGGTTGGGATGATGTTGCGTGGCATGGGATTTGATAACAATACATCAATATATTTGGCTTCTGGGAAAATATATCAGGCAGAGAGACATTTGGCTTCTTTAATAAAGATGTTTCCCAATCTGCATACGAAGGAATCTCTCACAGCTCCGGATGAGCTTGCTCCGTTTAAGGAATATTCCTCCCAATTAGCAGCACTGGACTACACAATATGCTTGTTTAGTGAGGTTTTCGTAACAACTCAGGGTGGTAACTTCCCTCATTTTCTGATGGGTCATCGAAGATTTCTCTACGATGGACATGCAAAGACAATTAATCCTGACAAGCGCAAGCTTGTTGGTCTCCTGGGGAATGCTAGTATTAGTTGGAGAACTTTCAAGGAGCAGATGGAAGCTATGCTTGGTGACAATGACCGGAAAGGAATCCTTGTACCGAGAGTTAGAAAAATTAATAGGAAAACTTCAGTCTACACGTACCCGTTACCAGAATGCAGATGTTTACAGCAGTTGCATACCAGTCAAATTGACCACAAACTAGACAGTCATGATAATTACATTCGAAGAGAAACTTAA 2043 0.4479 MAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGASETLLKLAMKSKSYAHTGNGYASESGSSSSPSPPRSPPRQLSTNISHCRRRLRPKALSHTTHRLESFAASIIARRNLRYFFLLPLLYISGLLMCVGPFSALIGHAPVPGSVYRSHEIFQKLWPDIQSDNSSAAELSSVWKYKRKLRENKPCPNITAVQHEHFASSGHSGFLIVEANGGLNQQRSAICNAVAVAGLLNAILVIPHFEFHNVWRDPSEFGDIYEEDHFISTLEGYVKVVKELPEVLMERYNYNISNITTIRIQAWAPVSYYLGVIYPIMQKEGVIRISPFANRLAMSVPPHIQFLRCLTNYKALRFASSISILAKKLVNRMIEKSSRTDGKYVAVHLRFEEDMVAFSCCIYDGGEVERLEMDSVREKGWKGKFKRKDRVILPNLNRIEGKCPLTPLEVGMMLRGMGFDNNTSIYLASGKIYQAERHLASLIKMFPNLHTKESLTAPDELAPFKEYSSQLAALDYTICLFSEVFVTTQGGNFPHFLMGHRRFLYDGHAKTINPDKRKLVGLLGNASISWRTFKEQMEAMLGDNDRKGILVPRVRKINRKTSVYTYPLPECRCLQQLHTSQIDHKLDSHDNYIRRET 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0340 680 Pfam Ubiquitin fold modifier 1 protein 6 80 IPR005375 GO:0071569
Lele04g0340 680 CDD Ubl_UFM1 7 81 - -
Lele04g0340 680 MobiDBLite consensus disorder prediction 105 131 - -
Lele04g0340 680 Pfam GDP-fucose protein O-fucosyltransferase 257 586 IPR019378 -
Lele04g0340 680 Gene3D - 4 87 - -
Lele04g0340 680 SUPERFAMILY Ubiquitin-like 2 86 IPR029071 -
Lele04g0340 680 CDD O-FucT_plant 257 594 IPR024709 -
Lele04g0340 680 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 158 660 IPR024709 -
Lele04g0340 680 FunFam Ubiquitin-fold modifier 1 3 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0340 Lele-ChrLele04 1980336 1991478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0340 256 656 Miscellaneous Gene Families AT1G22460 36.867 1.69e-82 270
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0340 04 1980336 1991478 Lele04g0340 04 1980336 1991478 ECH
Lele01g0336 01 1936636 1938871 Lele04g0340 04 1980336 1991478 hybridization
Lele02g0330 02 1860611 1863297 Lele04g0340 04 1980336 1991478 hybridization