Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0326 ATGGCATTTCCAACCTCAGCTGCGGCGGCGGCGGCGTTAGCAAGGCCTTCCTCCGTTGGCATGGTAACCAGACCAAGCGTTAGGTGGATCTTCAAGCCCCTCGCTATTTCTTCTTTCTCGTCTCCATCTTCGCCTTCCACACCTTCTCGAAGGCTCGTCCTTTACTCGAAGCCCGGTTGCTGCTTGTGCGATGGTCTCAAAGACAAACTTCAAGCTGCTTTCTTGCTCTCTGGTCCCGATTCACTTCACGACGTAGATTTGCAGATAAGGGATATAACCAGCAATCCGGAATGGGAAAGAGCTTTCCAATATGAGATACCAGTGTTGGCCAAATTACGCTCCGATGGCACAGAGGAAATTCTACCGCGATTGTCTCCTCGTGTTGGAATGGAACTCCTCCAAAAGAAGATAGCCGCTGCTTTCAGACAATAA 432 0.5046 MAFPTSAAAAAALARPSSVGMVTRPSVRWIFKPLAISSFSSPSSPSTPSRRLVLYSKPGCCLCDGLKDKLQAAFLLSGPDSLHDVDLQIRDITSNPEWERAFQYEIPVLAKLRSDGTEEILPRLSPRVGMELLQKKIAAAFRQ 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0326 143 Pfam Glutaredoxin-like domain (DUF836) 52 137 IPR008554 -
Lele04g0326 143 PANTHER GLUTAREDOXIN-LIKE PROTEIN C5ORF63 HOMOLOG 15 143 - -
Lele04g0326 143 Gene3D Glutaredoxin 46 135 - -
Lele04g0326 143 SUPERFAMILY Thioredoxin-like 52 135 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0326 Lele-ChrLele04 1897959 1900941 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0326 04 1897959 1900941 Lele04g0326 04 1897959 1900941 ECH
Lele01g0321 01 1848618 1849367 Lele04g0326 04 1897959 1900941 hybridization
Lele02g0316 02 1780939 1783159 Lele04g0326 04 1897959 1900941 hybridization