Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0321 ATGGCAGAGGAGGCACAGGAAACCGAAACTCCTAGGAAGGATACTAAGGCGGACGCTCGCGATATTGAGTCGCAGATTCAGACTGCTATGCGCGCTCGCGTTGCTCACTTCAAGGAACAAGCCGATTCTTTGACATTTGAGGGGGTTCGTAGATTGCTTGAGAAAGATTTGGGGTTGGAGCCATATGCACTAGACGTGCATAAGAGATTTGTCAAGCAATGCTTGCTGAAGAGCTTGGAAGGGGTTGGAGATGATAAGTCCCCAAAGATATCTGGGGATACAGGGGGAAAAGGTGGAAGTACACAAGAGAAAGAAGGATCAGCTGAAGAAATCCATTCAAAAAAGGATGTAAAGAATCGTTGTACTGACAATGAAGATAAAATGGAAGATTCTCCAGTATCGGGTCTGCTAAATGCAGAAAAATCAGTTAAACTGGCAACTGAGGAAGCTGAAGGCAATGGAAAAAATGCAATTCCAAGTGAGACCATGATTAAGAAAGCCATTAGAAAAAGATCTTCTTATGTCAAAGCTAATTCAGAGAAAGTCACAATGGCAGACCTTCGTCGACTATTGGAAGGAGATCTTAAACTTGAGAAATTTTCTCTTGATCCTTATAAGAAACTTATAAGTCGGCAGCTAGAGGAGGCGTTAAAATCTTGTGAAGTTTCAGAACCTGCAAACAGTGCTAGGAAAATTGTTAAGAAAAAGCCCAATGCCAAACCAGCTAAAAAGGTCAGTAGTGAAGAGAGCTCCGATGCCTCAGATCAGCATGCTGAAGAGGATGAGGAACAGGAAGATGAAATTAAACCTAGAAAAAGAAGTATTCCAAAGGGGAAGTTGCAGAACTCCCTTGGACCCAAAAAGCGGAAAGGATCCCCAGAGGAGACTGAATTATCTGCTAAGAAAAGGATCCAGTCAGCTAAAAAAGCCTCAGAAGACAGTGGAGATGCAGAAGATTCTGGAAAAGACTCTGAAGATGATCAGTCCCAATCATCACCTGAGAAAATCACAAAGAAGAAAGAAGTTTCAACTCCTGCGTATGGCAAACAAGTGGAGCACCTAAAATCTGTTATTAAAGCATGTGGAATGAGTGTTCCACCTGTTATCTACAGAAGAGTCAAGCAGGTGCCTGAAAATAAGCGGGACGGGCAGCTAATAAAGGAGTTGGAAGAAGTACTATCTAGAGAAGGATTGTCTTCAAATCCATCTGAAAAAGGTTGGCTTTGGTTGTTGAGCTTATGTTTGTATGTGCCCCTGGATGTTAGCTGCGATGTCTATGCTGTATATTGA 1290 0.4248 MAEEAQETETPRKDTKADARDIESQIQTAMRARVAHFKEQADSLTFEGVRRLLEKDLGLEPYALDVHKRFVKQCLLKSLEGVGDDKSPKISGDTGGKGGSTQEKEGSAEEIHSKKDVKNRCTDNEDKMEDSPVSGLLNAEKSVKLATEEAEGNGKNAIPSETMIKKAIRKRSSYVKANSEKVTMADLRRLLEGDLKLEKFSLDPYKKLISRQLEEALKSCEVSEPANSARKIVKKKPNAKPAKKVSSEESSDASDQHAEEDEEQEDEIKPRKRSIPKGKLQNSLGPKKRKGSPEETELSAKKRIQSAKKASEDSGDAEDSGKDSEDDQSQSSPEKITKKKEVSTPAYGKQVEHLKSVIKACGMSVPPVIYRRVKQVPENKRDGQLIKELEEVLSREGLSSNPSEKGWLWLLSLCLYVPLDVSCDVYAVY 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0321 429 PANTHER HIRA-INTERACTING PROTEIN 3 1 405 IPR037647 -
Lele04g0321 429 MobiDBLite consensus disorder prediction 1 21 - -
Lele04g0321 429 MobiDBLite consensus disorder prediction 324 346 - -
Lele04g0321 429 MobiDBLite consensus disorder prediction 103 130 - -
Lele04g0321 429 MobiDBLite consensus disorder prediction 217 347 - -
Lele04g0321 429 MobiDBLite consensus disorder prediction 288 317 - -
Lele04g0321 429 MobiDBLite consensus disorder prediction 81 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0321 Lele-ChrLele04 1868806 1871409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0321 17 403 EF-hand Containing Proteins AT1G44780 40.712 1.59e-69 225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0321 04 1868806 1871409 Lele04g0321 04 1868806 1871409 ECH
Lele01g0317 01 1815006 1819172 Lele04g0321 04 1868806 1871409 hybridization
Lele02g0312 02 1746675 1750761 Lele04g0321 04 1868806 1871409 hybridization