Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0316 ATGCCTATCATAGCCCATGTAGCTCTGAACTCAATAAATTTTGTTGCGCTCTTGATGCTTCCTATTAAAGTAGTTGAAATTTCCTTTTCACTTCAACCAAAAACTGTGATGATGATAAGGCGCAGACAGGCTCATGCTCATTTTGTTACTTCTTCAGAAAAATGGAACAGCCTTCGCTATACAGGGAATCACCCTCATGGTAAGAGATGGAGCACTGAGGATGATGATGTGCATCATGTGGCACGAGGTTCATTTCTGAGGCAGTTAAGTGTAAAGGAGGCTTGGAGATCAACGTCAAGCAGGTGGAGTGCGAGCAACAACTATAGCTGTGGGGGTGGGTTTGAGGGAAGTGTGGGTCAAATGGAAGGGTTTAGCAGCATGTATGGCCATGGGAATGAAGACAATGTCATGATGGTTAGGAAGAGAGTCATGGTGGTTGTCGATCCCACTCCACATTCCAAGCATGCTATGATGTGGGCACTCACCCATGTAGCAAATAAGGGTGATTTGCTCACTCTGCTTCACATTGTTCCTCCCCACAGTGGATCTGATTCTTCTTCTTGTTCTACCTATCTTGTCAACTATCTTGGTTCCCTTTGCAAAGATTGCAAGCCTGAGGTGGAAGTGGAAGCACTTGTGATTCAAGGGCCAAAGCTGGCAACAGTTTTGAGCCAAGTCAAGAAGCTGGAGGTATCTGTCCTGATATTGGGTCAAAAGAAGCCACCGTCACTTCTCTTCCACTGCTTATGTGGAACCAGCGGCAGCAGCAGCAAAGAGGAATTTGTAGAGAAGTGCATCAACAATGCTGATTGCTTGGCGATAGGGGTGAGGAAGCGAAGCCAAGGGACCAATGGCTACTTCATCAGCACAAGATGGCAGAAGAACTTCTGGCTACTGGCTTAA 903 0.4629 MPIIAHVALNSINFVALLMLPIKVVEISFSLQPKTVMMIRRRQAHAHFVTSSEKWNSLRYTGNHPHGKRWSTEDDDVHHVARGSFLRQLSVKEAWRSTSSRWSASNNYSCGGGFEGSVGQMEGFSSMYGHGNEDNVMMVRKRVMVVVDPTPHSKHAMMWALTHVANKGDLLTLLHIVPPHSGSDSSSCSTYLVNYLGSLCKDCKPEVEVEALVIQGPKLATVLSQVKKLEVSVLILGQKKPPSLLFHCLCGTSGSSSKEEFVEKCINNADCLAIGVRKRSQGTNGYFISTRWQKNFWLLA 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0316 300 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 82 300 - -
Lele04g0316 300 Gene3D HUPs 137 285 IPR014729 -
Lele04g0316 300 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 141 239 - -
Lele04g0316 300 CDD USP_Like 148 271 - -
Lele04g0316 300 Pfam Universal stress protein family 141 271 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0316 Lele-ChrLele04 1841379 1843481 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0316 04 1841379 1843481 Lele04g0316 04 1841379 1843481 ECH
Lele01g0313 01 1790583 1791770 Lele04g0316 04 1841379 1843481 hybridization
Lele02g0305 02 1717773 1718980 Lele04g0316 04 1841379 1843481 hybridization