Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0315 ATGGAAGAGAGCCGAATTTGCCAGGGGAGCGTGATTAGATCCCTCCTGTCCATTCTTCAATGGTGGGCTTTCAATGTGACTGTAATTATCATGAACAAGTGGATCTTCCAGAAATTGGACTTCAAGTTTCCACTCACAGTATCCTGTGTCCACTTCATCTGCTCAGCAATGGGAGCACATGTGGTAATTAAGGTGCTGAAGCTTAAACCACTGATAACTGTTGACCCAGAAGATCGCTGGAGAAGAATCTTTCCAATGTCCTTTGTGTTCTGTATTAACATAGTGTTGGGGAATGTGAGCTTAAGATACATTCCAGTATCTTTTATGCAGACAATAAAGTCATTCACACCTGCAACCACTGTTGTTTTACAATGGCTTGTATGGAGAAAACAATTTGACTTTCGTATTTGGGCTTCTCTTGTACCCATTGTTGGTGGGATACTTCTCACATCCATCACAGAGCTTAGTTTTAATATGTTAGGATTTTGTGCTGCATTATTTGGCTGTTTGGCGACATCTACAAAGACCATCCTTGCAGAATCTCTTCTACATGGATACAAGTTTGACAGCATAAACACAGTTTATTACATGGCTCCTTTTGCAACCATGATAATGGCAATGCCCGCAATGTTAATTGAAGGCAATGGAGTTCTTGATTGGCTTAATACTCATCCTTATCCTTGGTCGGCCCTCACTATTATTTTAGGCTCAGGGGTTATGGCTTTCTGCCTAAACTTTTCGATCTTTTATGTGATTCACTCCACCACTGCTGTCACATTTAATGTTGCCGGAAACCTCAAGGTTGCAGTAGCAGTCCTTGTTTCTTGGCTGATATTTGAGAACCCAATTTCGGCTTCAAATGCTTTTGGATGTGCCGTGACTCTTGTTGGTTGTACTTTCTATGGCTACGTCAGGCAAATTCTATCCCAACAGCCACCACCAGTTCCAGGAACCCCTCGAACTCCTAGGTCTAAGATGGAGCTGCTTCCTCTTGTAAATGATAAACTTGATGATAAAGTCTAA 1023 0.4184 MEESRICQGSVIRSLLSILQWWAFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSAMGAHVVIKVLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKQFDFRIWASLVPIVGGILLTSITELSFNMLGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMIMAMPAMLIEGNGVLDWLNTHPYPWSALTIILGSGVMAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFENPISASNAFGCAVTLVGCTFYGYVRQILSQQPPPVPGTPRTPRSKMELLPLVNDKLDDKV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0315 340 Gene3D - 22 158 - -
Lele04g0315 340 FunFam UDP-galactose transporter 1-like 47 158 - -
Lele04g0315 340 PANTHER SOLUTE CARRIER FAMILY 35 15 305 - -
Lele04g0315 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 300 - -
Lele04g0315 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 71 152 - -
Lele04g0315 340 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0315 Lele-ChrLele04 1837387 1840591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0315 8 340 Organic Solute Cotransporters AT1G77610 86.228 0.0 594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0315 04 1837387 1840591 Lele04g0315 04 1837387 1840591 ECH
Lele01g0312 01 1786688 1789892 Lele04g0315 04 1837387 1840591 hybridization
Lele02g0304 02 1713790 1716997 Lele04g0315 04 1837387 1840591 hybridization