Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0263 ATGGATTCGTGTGGCAATAAGATCTTAGATCCATCGTGGCTTGGGACGCAAACCCATGTTTCAAGGAGTTTCATGTGGCCGAAGGACAGCGTGGTGGAGGCCGAGGGAGAGCTGGAAGCGCCACTGGTTGACCTGGACGGCTTCATCAGAGGCGACGAAGACGCCACCCAGCATGCGGCGGAGCTGGTAAGGCAAGCTTGCTTGAGGCACGGCTTCTTCCAGGTGATCAACCATGGAATTGATTCGCGTCTCATCCATGAGGCCTATCAACAACTGGACGCTTTCTTCAACCTCCCACTCGACAGGAAACTAAGCATTCCCAAGACTGCTGGCACCGTGTGGGGCTATTCTGGTGCTCATGCCCATCGTTTTTCCTGCAACCTCCCATGGAAGGAGACCCTCTCTTTCCCCTTCCGCCACACTCAAGCCTCAGTGCCGGTTGTTTCTAACTTCTTTACTTCTAACATAGGACAAGATTTTCAACATGCTGGGATGGTGTTTCAGGAGTACTGTGAAGGAATGAAGGAGTTAGGGCTGAGGCTGATGGAGCTGCTGGGAATAAGCTTGGGGTTAGAGAGGGGGCATTACAGGGAGTTTTTTGAAGATGGAGAGTGTATAATGAGATGCAACTATTACCCGTCATGCAATGAGCCCGGTCTTGTGCTTGGCACGGGACCGCATTGCGACCCAACCTCCGTAACCATACTTCATCAAGATCATGTTGGAGGGCTCGATGTTTTTACAGACAACAAGTGGCAGAGGGTTCCTCCTCGTCCTCAAGCTTTGGTTGTCAATATTGGCGATACCTTTGCGGCACTATCAAATGGGAGATACAAGAGTTGCGTACACAGGGCAGTGGTGAAAAGGTACAATGAGAGGAGGTCCATGGCGTTCTTCGTGTGCCCCAAACGAGACAAGGTGGTGAGAGCCCATGAGGATGTGGTGGTCGGGGACGGCACCAGATTATACCCGGACTTCACTTGGTCCGATTTCCTTCTCTTCACTCAGTCCTTCCACAGAGCCGACCACTCCACTCTCCGCCACTTCACCCGCTGGCTCCTCTCCTCCAAACCCTCAGCTTAA 1083 0.5254 MDSCGNKILDPSWLGTQTHVSRSFMWPKDSVVEAEGELEAPLVDLDGFIRGDEDATQHAAELVRQACLRHGFFQVINHGIDSRLIHEAYQQLDAFFNLPLDRKLSIPKTAGTVWGYSGAHAHRFSCNLPWKETLSFPFRHTQASVPVVSNFFTSNIGQDFQHAGMVFQEYCEGMKELGLRLMELLGISLGLERGHYREFFEDGECIMRCNYYPSCNEPGLVLGTGPHCDPTSVTILHQDHVGGLDVFTDNKWQRVPPRPQALVVNIGDTFAALSNGRYKSCVHRAVVKRYNERRSMAFFVCPKRDKVVRAHEDVVVGDGTRLYPDFTWSDFLLFTQSFHRADHSTLRHFTRWLLSSKPSA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0263 360 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 202 302 IPR005123 -
Lele04g0263 360 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 41 331 - -
Lele04g0263 360 FunFam Gibberellin 20 oxidase 2 12 340 - -
Lele04g0263 360 Pfam 2OG-Fe(II) oxygenase superfamily 204 302 IPR044861 -
Lele04g0263 360 Pfam non-haem dioxygenase in morphine synthesis N-terminal 41 139 IPR026992 -
Lele04g0263 360 SUPERFAMILY Clavaminate synthase-like 15 340 - -
Lele04g0263 360 Gene3D - 14 338 IPR027443 -
Lele04g0263 360 PRINTS Isopenicillin N synthase signature 63 80 - -
Lele04g0263 360 PRINTS Isopenicillin N synthase signature 262 288 - -
Lele04g0263 360 PRINTS Isopenicillin N synthase signature 227 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0263 Lele-ChrLele04 1559629 1562456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0263 18 299 Glycosyltransferase AT5G59530 29.730 9.86e-30 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0257 02 1451480 1454326 Lele04g0263 04 1559629 1562456 hybridization