Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0235 ATGGATCTGATGAAAACCTTGAGCTTGAGGTTCTCCCCAATATCATTCTCACCCGTAATCGCTGCAAGTAATAACTTCTACTTGCCCCTCCCCTCTCCCAGAATTTTTTCTTTCAGATTCCGTGCCAGCTCATTCCATCATATTTCGAGAAAGTCCCAAATGACTCTCCGTGCCAAGGAAAGAAAATCGGAGTCGGAGCCCATTCTCGAACGCACACTTGTCGAAGAAATATCAATGAAGGATGAAGAGGACGTCCTTGATGATTTCGAATACGTGGAATCAGGGGATGAGGATGATAGCTACTACGACGAAGAGGATTATGAAGATGACGAAGCTGAACTCTTTGTAGGCGATGGGGGCGGAGGCGGTGGGATTTCCCTGGCTGGAACGTGGTGGGATAAAAAAGCACTGACGATTGCTGAAGAGGTTGCTAGGTCTTTCGATGGGGAACTGCAAATATATGCTTTCAAGACATTGGTCAATTCCACCATTCGAGTGCGCATCGAGAGGCTTTCCAACAAGTCCGGCTCGCCTAGCATGGAAGATATTGAAGCTTTTTCTACAGCCTATAGATCAAAGTTAGATGAAGCAGAGCTTGCCAAATTTGTGCCTGAAGATATAAGTTTGGAGGTGTCTTCTCCTGGTGTTGAAAGGATAGTCCGGATTCCAAATGATCTGGATCGATTCAAGGAACGGGCGATGTATGTGAAATACATGAGTAACGAGGATTTAGAAGGTTCATCTGCAGAAAGTGAGGGTGTGTTCCGCCTCATAGCCTTTGACCTGGAAACAAGATGTTGCACTTGGGGCCTGGCAGACGTGAGAGTAAATAGAGAGAAAGCAGGGAAAGGAAGACCACTGAACAAAAAGCAAAGAGAATGGCGTTTAAGCACTCCTTTTGATTCTTTACGTTTAGTTAGGCTGTATTCTGAAATTTAA 939 0.4515 MDLMKTLSLRFSPISFSPVIAASNNFYLPLPSPRIFSFRFRASSFHHISRKSQMTLRAKERKSESEPILERTLVEEISMKDEEDVLDDFEYVESGDEDDSYYDEEDYEDDEAELFVGDGGGGGGISLAGTWWDKKALTIAEEVARSFDGELQIYAFKTLVNSTIRVRIERLSNKSGSPSMEDIEAFSTAYRSKLDEAELAKFVPEDISLEVSSPGVERIVRIPNDLDRFKERAMYVKYMSNEDLEGSSAESEGVFRLIAFDLETRCCTWGLADVRVNREKAGKGRPLNKKQREWRLSTPFDSLRLVRLYSEI 312
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0235 312 Hamap Ribosome maturation factor RimP [rimP]. 134 312 IPR003728 GO:0042274
Lele04g0235 312 SUPERFAMILY YhbC-like, N-terminal domain 141 217 IPR035956 -
Lele04g0235 312 Pfam RimP N-terminal domain 154 217 IPR028989 -
Lele04g0235 312 PANTHER OSJNBA0006B20.18 PROTEIN 49 312 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele04g0235 Lele-ChrLele04 1393745 1396066 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0235 04 1393745 1396066 Lele04g0235 04 1393745 1396066 ECH
Lele02g0229 02 1294078 1296388 Lele04g0235 04 1393745 1396066 hybridization