Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0233 ATGAATTTGACGGTTGTTTTATGTTCTGCCATATCTTTGTATACGTTCCTTGAGTCCACAATCAGGTCAGGAAATATGTGGCTCCTAAACCCAGGTGTTGAGTCTACGGGAACCTTCAGCTGGGCTATCTTCAGTTCAAGTATATTTGTGCTTGTTGCACTTGTTCTCTCCATGTATCTGATTTTTGAGCATTTATCTGCCTATAATCAGCCAGAGGAGCAGAAGTTTTTGGTTGGTCTCATTTTAATGGTTCCTGTTTATGCACTGGAATCGTTTTTGTCACTGCTTGATTCAAGTGCGGCATTCAACTGTGAAATTATCCGAGATTGCTATGAGGCTTTTGCATTATATTGCTTTGAGAGATACTTGATAGCTTGCTTAGGTGGCGAGGACAAGACAATTCAGTTTATGGAAAGCATGAGTGTAATGGATTACAACTCTCCTCTACTAAAAGAAGCATATGCATACGGAGTTGTAGAGCATCCATTTCCTTTAAACTGCCTCTTAAGAGATTGGTATCTGGGTCCTGACTTCTATAATGCTGTGAAAATTGGCATTGTGCAATATATGATACTAAAAATGATATGTGCATTGCTGGCAATGATCCTCCAGTCTTTCGGGGCATATGGGGAGGGGAAGTTTGCATGGAAGTATGGGTATCCCTACCTCGCAGTTGTTCTTAATTTTAGCCAGACATGGGCCTTATACTGCCTTGTACAGTTCTATTCTGTTACTAAAGATAAATTGGAGCCAATTAAACCGCTGGCTAAGTTCTTAACTTTCAAGTCAATTGTCTTTCTGACATGGTGGCAAGGGGTGGCAGTTGCATTCCTTTTTTCAGTCGGAGCATTTAAAGGTTCATTGGCGCAGGAGCTGAAAACACGTATACAAGACTACATTATCTGTATAGAGATGGGCATAGCTGCTGTTGTGCACCTTTATGTGTTCCCTGCAGTACCTTACAAAAGGGGAGAGAGGTGTGTCCGTAATGTAGCGGTGATGGATGACTATGCATCGCTAGGGGCATTACCTGACCCCGAGGAGGTTCAAGACTCTGAACGTACAACCAGAATGCGGCTTGGACGACAGGATGAGAGACAGAGAATGAAATTTACTCACAGTGTTCGTGACGTGGTTGTTGGAAGTGGTGGAATTATTGTTGACGACATGAAATACACAGTTTCACATGTGGTAGAACCAGTTGAAAGGGGTATTGCTAGGATAAACAGAACATTCCATGAGATATCAGAGAACGTGAAACGGCATGAGGAGAGGAGAAGAAGTACTAAGGATGATAGCCATCTCGTACCCTTGCGGTCGTGGAGAACAGAATTTCCTGAGCTTCAAGATATTCTAGTGGAAGGGAGCATCAGTGACAGTGGTTTGCCCAGCGGAAAGAGAAGGCCTCCCCAATCCAGAGCGTCAACATCTACTATGTGA 1440 0.4313 MNLTVVLCSAISLYTFLESTIRSGNMWLLNPGVESTGTFSWAIFSSSIFVLVALVLSMYLIFEHLSAYNQPEEQKFLVGLILMVPVYALESFLSLLDSSAAFNCEIIRDCYEAFALYCFERYLIACLGGEDKTIQFMESMSVMDYNSPLLKEAYAYGVVEHPFPLNCLLRDWYLGPDFYNAVKIGIVQYMILKMICALLAMILQSFGAYGEGKFAWKYGYPYLAVVLNFSQTWALYCLVQFYSVTKDKLEPIKPLAKFLTFKSIVFLTWWQGVAVAFLFSVGAFKGSLAQELKTRIQDYIICIEMGIAAVVHLYVFPAVPYKRGERCVRNVAVMDDYASLGALPDPEEVQDSERTTRMRLGRQDERQRMKFTHSVRDVVVGSGGIIVDDMKYTVSHVVEPVERGIARINRTFHEISENVKRHEERRRSTKDDSHLVPLRSWRTEFPELQDILVEGSISDSGLPSGKRRPPQSRASTSTM 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0233 479 Pfam Organic solute transporter Ostalpha 43 321 IPR005178 -
Lele04g0233 479 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 38 429 IPR005178 -
Lele04g0233 479 MobiDBLite consensus disorder prediction 456 479 - -
Lele04g0233 479 Coils Coil 405 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0233 Lele-ChrLele04 1378529 1381438 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0233 04 1378529 1381438 Lele04g0233 04 1378529 1381438 ECH
Lele01g0232 01 1330164 1331584 Lele04g0233 04 1378529 1381438 hybridization
Lele02g0227 02 1279868 1283103 Lele04g0233 04 1378529 1381438 hybridization