Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0226 ATGTAGCCAAACATCAACCCGGTCCCGTTTGGTTGCATCCTCCATTCGGAGGCATCTCAGACTTCAATGCAGAACAAGGGATCGAGCTATAGGCTTTCCACCATGGCCTATCGATCCCGGATGCCAACTCTTCTGATCTCCATGTTTGCTATTTTTGCTTCTGTCTACGTCATTGGAAGGTTATGGCAGGACGCAGAGAACAGGGTGTATCTGATTAGAGAACTTGACAGGATAACTGGGCAGGGGCAATCTGCTATATCCGTGGATGATACATTGAAAATCATAGCCTGCAGGGAACAACATAAGAAGCTTGATTCCCTTGAGATGGAACTTGCTGCAGCTAGACAAGAAGGCTTTGCTTCAAAACGTTTGACTGAGACTAATGGGACTTACACTAGGAGAGGGCCCTTATTAGTGATTGGCATAATCACAAGGTTTGGCCGGCAGAACAATAGAGATGCAATCCGCAAGGCATGGATGGGAACTGGTCCAGCTTTGAAGAAAATGGAGGATAATAAGGGCATTATTGCACGATTTGTTATTGGAAGAAGTGCTAATCGCGGGGATGGTCTGGATAGAGACATTGATCGTGAAAATAGGCAGACTAATGATTTCATGATCCTCGATAACCATGTGGAGGCTAATGAGGAGCTCCCAAAGAAGGCTAAGTTATTCTTTGCTCTTGCTGCAGATAAATGGGAAGCTGAGTTTTATGCCAAAGTCAATGATGATGTTTATGTGAATATTGATGCATTGGGAGCTACTCTTGCAACTCATTTAGATAAACCTCGTGTTTACATAGGGTGTATGAAGTCGGGCGAAGTATTCTCTGAACTGAATCATAAATGGTATGAACCAGAATGGTGGAAATTTGGGGACAAAAAATCATATTTTCGTCATGCATCAGGAGAGATGTATGTCATATCTCGTGCTTTGGCTAAATTCATATCAATTAACAGATCAATTCTTCGTACCTATGCCCATGATGATGTTAGTGCTGGGTCCTGGTTTATTGGGCTCGATGCGAAGCATGTTGATGAGGGAAAGTTTTGTTGCTCATCTTGGTCATCAGGAGCAATTTGTGCGGGTGTCTGA 1095 0.4356 MXPNINPVPFGCILHSEASQTSMQNKGSSYRLSTMAYRSRMPTLLISMFAIFASVYVIGRLWQDAENRVYLIRELDRITGQGQSAISVDDTLKIIACREQHKKLDSLEMELAAARQEGFASKRLTETNGTYTRRGPLLVIGIITRFGRQNNRDAIRKAWMGTGPALKKMEDNKGIIARFVIGRSANRGDGLDRDIDRENRQTNDFMILDNHVEANEELPKKAKLFFALAADKWEAEFYAKVNDDVYVNIDALGATLATHLDKPRVYIGCMKSGEVFSELNHKWYEPEWWKFGDKKSYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFIGLDAKHVDEGKFCCSSWSSGAICAGV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0226 364 Pfam Domain of unknown function (DUF4094) 39 116 IPR025298 -
Lele04g0226 364 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 102 344 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele04g0226 364 FunFam Hexosyltransferase 127 356 - -
Lele04g0226 364 Pfam Galactosyltransferase 151 346 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele04g0226 364 Gene3D - 137 352 - -
Lele04g0226 364 Coils Coil 97 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0226 Lele-ChrLele04 1347091 1353503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0226 43 364 Glycosyltransferase AT5G53340 72.360 2.77e-180 501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0226 04 1347091 1353503 Lele04g0226 04 1347091 1353503 ECH
Lele01g0227 01 1301138 1305225 Lele04g0226 04 1347091 1353503 hybridization
Lele02g0222 02 1251279 1255482 Lele04g0226 04 1347091 1353503 hybridization