Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0148 ATGTCTCAAATCACAATAAAATCTCCAAAACACTGTGCTCAGTACAAGCAAGGCTTCAAGATTGAAAAGAACAGCTGCAAGAAGCTCTTCTTGGCTCTCTCTTCATTCATCACTGCAATTCTTCTGCTATCACTTGCCTTATGGGTCATCCTCCGTCCTGCCAAGCCTCAATTCTCCCTCCAACAAGTTGATATCTACCAGCTCAGTCTCTTAGGATCCCACGTAAACTCTTCCCTTCAGCTCACGCTTCTCTCAAAGAACCCAAACCAGAAAGTCGCCATTTACTATGACGACTACCAAGTATACGCAACCTACAAGGGCCAGCTCATAACTTCATATACCTCTCTGCCACCGTTCTATCAAGATCATGAAGAGAGCAATCTCTTGACGGCTTCTCTGGTAGGAGCTGAAGTCCCTGTGGCTCCCTCACTTGGCTATGAAATGGGTCGTGATCAAACAGTTGGAAGACTGGTTTTGAATCTGAAAGTAAGTGGAAGGCTTCGGTGGAAAGTGGCGACGTGGGTCACTGGGCATTATGGGTTTCATGTTAATTGTGTTTCGGTCATGGCGTTCGAGCCCTCCATGCCTCCTGTTCCTCTCACTTCAAACCAGGCTTCTCAGTGTTCTACCACAGTTTAA 639 0.4648 MSQITIKSPKHCAQYKQGFKIEKNSCKKLFLALSSFITAILLLSLALWVILRPAKPQFSLQQVDIYQLSLLGSHVNSSLQLTLLSKNPNQKVAIYYDDYQVYATYKGQLITSYTSLPPFYQDHEESNLLTASLVGAEVPVAPSLGYEMGRDQTVGRLVLNLKVSGRLRWKVATWVTGHYGFHVNCVSVMAFEPSMPPVPLTSNQASQCSTTV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0148 212 PANTHER OS05G0367900 PROTEIN 26 199 IPR044839 GO:0098542
Lele04g0148 212 Pfam Late embryogenesis abundant protein 82 185 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0148 Lele-ChrLele04 837777 838415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0148 11 185 EF-hand Containing Proteins AT5G21130 22.778 2.92e-08 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0148 04 837777 838415 Lele04g0148 04 837777 838415 ECH
Lele02g0152 02 840652 841290 Lele04g0148 04 837777 838415 hybridization