Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1329 ATGGTATCGGTCTTCATTCTGCAGCCTTAATACACTATGGTAGCAAAAACTCGGCAGAATTCTACTAACTCTCCAAGTCCAAAACCAGAGGTTGGAGAGATTGATACTAGTCCACCTTTTCAGTCTGTTAAGGATGCTGTCACTCTATTCGGGGAAGGATCTTTATCCGGGGAAAAACCTGGGATTAGAAAGGCAAAGGCTTATTCTGCTGAGAGAGTTTTGGCCAAGGAGACACAACTTCATTTAGCCCAGAAAGAGCTGAACAAGTTAAAGGAACAGCTAAAGAATGCTGAAACCACTAAAGATCAAGCTCAAGTGGAGCTTGAAAAGGCTAAAAGAACTGTTGATGATCTGACAGAAAAATTGAAGGCTCTAAATGAATCCAGGGCACTATCCATTAAGGCAACTGAAGCTGCTAAAAATCAGGCACAACAGGTTGAAGAAAACTATGGCCACCCTGATGGAATTAACGGTGCTTGGAAAGAAGAGTTAGAAACTGCAGTTAAGAAGTATGCAACTGTTATCACAGAACTTGATGCTTCTAAGCAAGAACTGAGTAAGATTCGTCAGGAGTGTGATTCATCCTTGGAAGCAAGACATTCTGCTTTCAAGCTAGCATCGGAAGCCAAAGATTTGATGAAGGCAAACTCGGAAAGAGTGGCTGAGCTGTCTAAAGAAATTTCCTCTGTGCATGAATCAATTGAGCAAATGAAGCTTGCTACTGTGCAGGCACAGCAAGATCAAGCTAGGATATTAGCTGAGAAAGATGTACTTAGACAGTCATATAAAGCCACCCTTGAAAATTCGCAAAAGAAATTGCTTGCTTTAAGAAAGGAATTCAATCCCGAGCTCACCAAAAATCTTGAGGTGCAGCTGAGCGAGACAATGAATCAAATTGGGGCTCTGCAAAAAGAAATGGAAAGTAAGAAGACTTTAGACTTAGATACTGTGAAAAGTGTCACGTTGGAGCTTGATGATGCTAAGGGATCACTGCAGAAAGTCGCAGAAGAGGAAATGTCTCTTAGAAGTTTGGTGGGAGCTCGTAAGGTGGAACTGGATAATGTGAAAAGGGAGCACTCTGAATTGAAGGAGAAAGAATCAGAAACTGAATCTGTTGTGGGGAATCTGCATGTCCAACTCCGGAAAAGTAAGTCTGAGCTGGAAGCGTGCATGGCAGAAGAGTCCAAGGTTAGAGGTGCGTCTGAGGAAATGATCTTGACACTGAGCCACTTGTCAGCTGAAACTGAAAATGCACGGAGGGAAGCTGAAGATATGAAGGCTAAGGCTGAAGAGTTGAAGAAGGAAGTTGAAGTCACCAAAGTTGCATTAGAAGATGCAGAGAAAAAGCTTAGAGTAGCGCTGGAAGAAGCAGAAGCAGCAAAATCAGATGAGGCAAGTGCTCTTGATCAGATTAGGGTCTTAACTGAGAGGACTAGTGCAGCGCGTGCATCAACTTCTGAATCTGGCGCCAAAATTACAATTTCAAAAGAGGAGTTTGAATCATTGAGTCGAAAAGTTGAGGAGTCTGATAAATTAGCAGATATGAAAGTAGCTGCTGCCATGGCACAGGTTGAAGCAGTGAAGGCCAGTGAACAGGAGGCGATCCAAAGGTTAGAGGCAACTCAGAAGGAGATCGAGGATATGAAGGCTGCAACACAGGGGGCCTTGAAAAAGGCTGAGATGGCTGAAGCTGCGAAGAGAGTTGTGGAGAACGAGCTTCGCAAATGGCGTGAACGGGAGCAGAAGAAAGCAGCAGAAGCCGCATCGCGTATATTGGCTGAAACACAGGTTTCATCAGAGTCATCTCCACTCCATTATACGATTCAAAAGCCAATTCAACCTACAAAAGCTGTTGAGGTGCGCAAATTGGAGAAAGAAAAGGTTTCAATTTCAAAGAAGGTACTCCTGCCTAATCTATCCGGCATCTTTCACTGGAAAAAGAACCAGGTCGAGGGCGGATCTCCATCTTACCTGCCCGGTGAAAACCCAGTGTGA 1995 0.4391 MVSVFILQPXYTMVAKTRQNSTNSPSPKPEVGEIDTSPPFQSVKDAVTLFGEGSLSGEKPGIRKAKAYSAERVLAKETQLHLAQKELNKLKEQLKNAETTKDQAQVELEKAKRTVDDLTEKLKALNESRALSIKATEAAKNQAQQVEENYGHPDGINGAWKEELETAVKKYATVITELDASKQELSKIRQECDSSLEARHSAFKLASEAKDLMKANSERVAELSKEISSVHESIEQMKLATVQAQQDQARILAEKDVLRQSYKATLENSQKKLLALRKEFNPELTKNLEVQLSETMNQIGALQKEMESKKTLDLDTVKSVTLELDDAKGSLQKVAEEEMSLRSLVGARKVELDNVKREHSELKEKESETESVVGNLHVQLRKSKSELEACMAEESKVRGASEEMILTLSHLSAETENARREAEDMKAKAEELKKEVEVTKVALEDAEKKLRVALEEAEAAKSDEASALDQIRVLTERTSAARASTSESGAKITISKEEFESLSRKVEESDKLADMKVAAAMAQVEAVKASEQEAIQRLEATQKEIEDMKAATQGALKKAEMAEAAKRVVENELRKWREREQKKAAEAASRILAETQVSSESSPLHYTIQKPIQPTKAVEVRKLEKEKVSISKKVLLPNLSGIFHWKKNQVEGGSPSYLPGENPV 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1329 664 Pfam Weak chloroplast movement under blue light 33 582 IPR008545 -
Lele03g1329 664 Coils Coil 352 372 - -
Lele03g1329 664 Coils Coil 73 128 - -
Lele03g1329 664 Coils Coil 285 305 - -
Lele03g1329 664 Coils Coil 521 579 - -
Lele03g1329 664 Coils Coil 259 279 - -
Lele03g1329 664 MobiDBLite consensus disorder prediction 16 30 - -
Lele03g1329 664 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 32 619 - -
Lele03g1329 664 Coils Coil 408 463 - -
Lele03g1329 664 MobiDBLite consensus disorder prediction 16 39 - -
Lele03g1329 664 Coils Coil 206 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1329 Lele-ChrLele03 8009167 8013016 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g1329 03 8009167 8013016 Lele25g1430 25 10485389 10486144 CCT
Lele03g1329 03 8009167 8013016 Lele26g1460 26 10366235 10366990 CCT
Lele03g1329 03 8009167 8013016 Lele27g0652 27 14475898 14476656 CCT
Lele01g1315 01 8022088 8025389 Lele03g1329 03 8009167 8013016 hybridization
Lele02g1587 02 19768565 19772132 Lele03g1329 03 8009167 8013016 hybridization