Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0877 ATGTCATCTGTTCTATCCAGTCCCTGCTACCCGATGGAAAACCCGGTGATAGAATCTCTGCTCCGCCACGGCCATCATAGGTCAGGGGAGAAACGTGGCGGTGGAGGAGGTGGCAAGTTCTCCACCGGTGTTCTGTTAAAAATGTTCAAGCTCTTCCCTATGCTGACGTCGGGCTGCAAAATGGTGGCGCTTCTGGGGAGACCTCGTAAGCCTATGATCAAGGACAATGCGACGTCGGGGACGGTCTTTGGATACAGGAGAGGGAGGGTGAGCCTAGCGATACAAGAAGATCCTCACTGTATGCCGTTCTTCCTTATAGAGCTACCGATGCACACGAGTGCTCTGAACAAAGAAATGGCGTCGGACATACTGAGGATTGCGTTGGAGAGCGAGACGAAGACGCATAAGAAGAAGCTGTTGGAAGAGTTTGTGTGGGCGGTGTATTGCAATGGGAGAAAAGTGGGTTACTCGATAAGGAGGAAGCAGATGAGCGAAGATGAGATGCATGTGATGCAGCATTTAAGAGGGGTGTCAATGGGTGCCGGAGTTATTCCGAGTCCGGCGTCGGAGAAGGAAAGTCCAGATGGGGAATTGACGTATATGAGGGCCAGATTTCAGAGGGTGATAGGTTCCAAGGACACTGAAACTTTGTACATGATCAACCCAGATGGCGCCCAAGGCCCAGAGTTCAGCATTTTCTTTGTTAGAGCTCATTAG 717 0.5105 MSSVLSSPCYPMENPVIESLLRHGHHRSGEKRGGGGGGKFSTGVLLKMFKLFPMLTSGCKMVALLGRPRKPMIKDNATSGTVFGYRRGRVSLAIQEDPHCMPFFLIELPMHTSALNKEMASDILRIALESETKTHKKKLLEEFVWAVYCNGRKVGYSIRRKQMSEDEMHVMQHLRGVSMGAGVIPSPASEKESPDGELTYMRARFQRVIGSKDTETLYMINPDGAQGPEFSIFFVRAH 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0877 238 Pfam Protein of unknown function, DUF617 79 236 IPR006460 GO:0010274
Lele03g0877 238 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 79 236 IPR006460 GO:0010274
Lele03g0877 238 PANTHER PROTEIN MIZU-KUSSEI 1 45 236 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0877 Lele-ChrLele03 5117125 5117841 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0877 03 5117125 5117841 Lele03g0877 03 5117125 5117841 ECH
Lele01g0878 01 5093028 5093744 Lele03g0877 03 5117125 5117841 hybridization
Lele02g0864 02 5256226 5256942 Lele03g0877 03 5117125 5117841 hybridization