Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0711 ATGGGTGGTGGTAGAGTTGAAGTTGTAAGTAGCAAGGGATGCTCTGGACTGTTTTCACCTTCATTCGCTTTATTCAGGGGTTTGCATCTGCAACCTTTGGAGCCAATGACTCCTGTTTCATCTTTTCACGGTTCTGAATCAGTGGAAGGGCGATCAAGTGCTCCTTTTGCTGGCCTCAGTATATGCGTAACCGGTCTATCTAAAGAAGCAAGGAAACAGAAAGATCTGATGTTATGCTTTGAGCTCATCTTTTACGGTCTCTTGCTTCATTTCTTTGGTGGGCGTAAGTTTGAGCATGCACTGAAGCACGGCGCAAGAAATGGTCTTTTTATTGTCACACTGGGTTGGTTTGTCGATAGTGTTAGAAAAAATGTGAGGTTGAGTGAATCACTTTACAGTGTGAAGAACTATGGCAATAACAATACAAACTTGGATGATTATAAACTGCTTTCGGGGTATACAAATGCTGAAAATTCTTGTCTTCCTGTAAGTTTTCACGAAACTAAGCAAAATGATAGAGCTGATGAATTCCAAAGATTTCCTGGGCGCGAGTCTAGGAAGAATGCGGATTTGCCTTTATCTGGTTGCTCTATATATGTTGATCCAGACATCTCACCTGAATTGCGAACAAAGGTTGTTGAGACTGCTTCCAGAGAAGGTGCCAGTTTGATGGAACAGTTTTTTGTTGGTTGTAATGCTAGCCATGTAGTCACTGAAGGCGCATCAATTCAAAGATATCTTGGATATTCTAGTAACTTTGTTACACCACTGTGGATTCTAAAAACAGCTAAGGAGAAACAAGTGCAAAGGCTTGTTCACATGTCTTCCGATTTGGCCAGACAAGTCGGTTTGATGCTTGAGGACATTCATAATGGCATTATAGGGGAGACTTGTCAGACTCCAGTGCGTCCTATAACACCTACCAACCTTCTGGATTCTATCTGCTGGTCAATATCTGAACCAACTTCAACAGCTTCCATTTACACTGACTCTTTCAGTGAAGATCCTAGTGAGAATAATTTTTCAACCTTTAGCGATGTGAAGGGGGTCGTCAACGATTTAGAAGCTTCATTTTCAAACTCTACTCGACCTCTATCAGAAAGTGAGAAATCTGAACTGATATTTAAAAACCATTTTCTTACGATTCTCTTTCCAATTGATCGATTTGCTGAGATGGGGCCTTCTTCAAGAACATTTTTCAGCCCCAACGGCTTTACATGCCTGCAGGTGTTGGATCATATATATGCATTTTATCAGGTACAAGATCTATTCTTTTGGAACTTCTCTTGCCTTACTTATGGTCTTGAGGCTCTTTTTTATCCTTTGATCGATCCGAGTAGTTATGAGGTATTGTATGCTGCGGTAGGAGAATCTGTTGGCCCATGA 1386 0.4113 MGGGRVEVVSSKGCSGLFSPSFALFRGLHLQPLEPMTPVSSFHGSESVEGRSSAPFAGLSICVTGLSKEARKQKDLMLCFELIFYGLLLHFFGGRKFEHALKHGARNGLFIVTLGWFVDSVRKNVRLSESLYSVKNYGNNNTNLDDYKLLSGYTNAENSCLPVSFHETKQNDRADEFQRFPGRESRKNADLPLSGCSIYVDPDISPELRTKVVETASREGASLMEQFFVGCNASHVVTEGASIQRYLGYSSNFVTPLWILKTAKEKQVQRLVHMSSDLARQVGLMLEDIHNGIIGETCQTPVRPITPTNLLDSICWSISEPTSTASIYTDSFSEDPSENNFSTFSDVKGVVNDLEASFSNSTRPLSESEKSELIFKNHFLTILFPIDRFAEMGPSSRTFFSPNGFTCLQVLDHIYAFYQVQDLFFWNFSCLTYGLEALFYPLIDPSSYEVLYAAVGESVGP 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0711 461 SUPERFAMILY BRCT domain 53 135 IPR036420 -
Lele03g0711 461 Gene3D BRCT domain 51 141 IPR036420 -
Lele03g0711 461 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 3 292 - -
Lele03g0711 461 ProSiteProfiles BRCT domain profile. 188 268 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0711 Lele-ChrLele03 4206022 4209531 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0711 03 4206022 4209531 Lele03g0711 03 4206022 4209531 ECH
Lele01g0714 01 4192631 4196363 Lele03g0711 03 4206022 4209531 hybridization
Lele02g0699 02 4204150 4208615 Lele03g0711 03 4206022 4209531 hybridization