Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0621 ATGAGATTCAAGAAAGGAGCCAAAGTGGAGGTCCTGAGTTATAGTGTGGCGCCTTATGGGGAATGGCGTTGTGCTGAGATTATCTCTGGTAATGGGCACACTTACAGTGTCCAGTATAACTGTTCTAGCATAACTAATGAGGCCATAGTGGAGAAGGTTCCAAAGAAATCCATCAGGCCTTCTCCCCCTCTTGTAAATTGCATTGATAGTTGGTCGGCTGATGATGTTGTGGAGGTCAGTCATGCTGGTTACTGGAAAGTGGGTTTTGTTTCAAGGTTTCTCGGTGAAGACATTTATTTGGTGAGGCTGCTTGGATCTTGCAAGGAGTTAAGAGTTCACAGGCTTAACATAAGGGCACGCCAATGTTGGCAAGACAACCAATGGATTATGATGCGGAAGGGCAATTCTAGAGTTGGGAAGTCTGGCAAGAATTTGAGCTTTAACAGTTATAAGATGAAACCTGAAGTTCCGCAGCCTAGAAATGATCGTTTTCCCATAGTGGATGGAAGTGGACTACGGGAGTCTCATGTAGTGTCATCCACATCATTGAAGAGAGTGTCTCCTTATTGCTTCTCCCTCATTGATACATACCCAAGAAAAATGAGAGCTGTTATGAATGAGGAAGTGCTTGAAAAGGTAGATGCTGTTGCTTACCCAAGTGAACATATGGGTGAAAAATGCATGCTTGCTTCCTTTAATAATGGAACAAATCAATATAATAAAATGGCGATGGTGAACCCTAATAATGGTATCCCACATTGTCTTGAAAGAATCAATGATTCTAATGATTCTTGTAGTGATATGTGTTCAGTTGGAAGTTGTAGTGTGATAAGTAGTGGCCCAAACAAATTCTCTAGGGATATGTTAGCGGGTCCTTGCCAAGATGCAGATAGTCTTTGTAGCGATGCAGAGTCTTTAGATGTTGGAGGTGAGGAAGAAAGATGTTCCCTTTATCCAAAAGACGATATAGCAGCAAGAATTCATAGGTTAGAGTTGCATGCTTATCGCAGTACTCTAAAAGCTATGGATGCTTCTGGTCCCCTAACTTGGGACCAAGAAGCACTATTGACTAATCTTCGTATTTCACTTCATATTTCAAATGATGAACACTTGTTGGAGATAAGGAACTTAGTTTCTTCTGTCAATGATCAAGGACTGGTGACTAGTCTATGTAGTGAAACTCAAAATATGGCATCTTACATAATGGCCAGTGTTGGAGGCCTGCATGGCTTGCTTCCAAAGGCTAAACATGATGCTAGTCTATTTCAGGTATGGTTAGAAAGGACACTTGCTGTGTCAAAATCAGAACATGAACTTCCTAACAGCCGCCGTGATATAACCGTGACATGGAAGTCTAGTTCTCGTCTGTCAGGTGGATTATGTTCCTGGAAATGGCATACTCTATCCTGA 1410 0.4184 MRFKKGAKVEVLSYSVAPYGEWRCAEIISGNGHTYSVQYNCSSITNEAIVEKVPKKSIRPSPPLVNCIDSWSADDVVEVSHAGYWKVGFVSRFLGEDIYLVRLLGSCKELRVHRLNIRARQCWQDNQWIMMRKGNSRVGKSGKNLSFNSYKMKPEVPQPRNDRFPIVDGSGLRESHVVSSTSLKRVSPYCFSLIDTYPRKMRAVMNEEVLEKVDAVAYPSEHMGEKCMLASFNNGTNQYNKMAMVNPNNGIPHCLERINDSNDSCSDMCSVGSCSVISSGPNKFSRDMLAGPCQDADSLCSDAESLDVGGEEERCSLYPKDDIAARIHRLELHAYRSTLKAMDASGPLTWDQEALLTNLRISLHISNDEHLLEIRNLVSSVNDQGLVTSLCSETQNMASYIMASVGGLHGLLPKAKHDASLFQVWLERTLAVSKSEHELPNSRRDITVTWKSSSRLSGGLCSWKWHTLS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0621 469 SMART agenet_At_2 69 125 IPR014002 -
Lele03g0621 469 SMART agenet_At_2 1 66 IPR014002 -
Lele03g0621 469 Pfam ENT domain 326 379 IPR005491 -
Lele03g0621 469 SMART ENT_2 323 392 IPR005491 -
Lele03g0621 469 Pfam Agenet domain 6 63 IPR008395 -
Lele03g0621 469 Gene3D ENT domain 318 442 IPR036142 -
Lele03g0621 469 SUPERFAMILY ENT-like 318 392 IPR036142 -
Lele03g0621 469 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 323 411 IPR005491 -
Lele03g0621 469 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 2 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0621 Lele-ChrLele03 3666298 3668745 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0621 03 3666298 3668745 Lele03g0621 03 3666298 3668745 ECH
Lele01g0621 01 3650622 3652822 Lele03g0621 03 3666298 3668745 hybridization
Lele02g0610 02 3665470 3667812 Lele03g0621 03 3666298 3668745 hybridization