Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0543 ATGGCTCCAATGATCCGAACAGATTGTCAAGTCTGGAAAAACATGTCCATGCTTGTCTTCTTCACTTTGTTGCTAGCTTCAGTTTTTGTTTCGGCTCATGGAAGAGAGACATCTGCAGGTTCGAACGAAACAGACCCATTCTCTACCTATATGGTCAACGCCATGCATTTCTTATGGAACCCTGCTCAATCTGGTTATCACCATGTCTGGCCGGAAATGAAATTTGGATGGCCTATCATTGTTGGGACGTTGATTGGATGCTTGGGAGGAGCATTTGGGAGCGTTGGCGGCGTTGGCGGCGGCGGCTTCTTTGTTCCAACGTTAATCCTCATTATTGGCTTTGATGCCAAATCTGCAACCGCCATTTCAAAATGTATGATCACGGGCGCAGGAATCTCCACGGTTTACTTCAACTTGAAGCTGAGGCATCCTACGTTTGATATACCCTTAATTGACTATAACCTCGTGCTGCTTATGTTGCCCGTAATCTTGCTGGTAGTATTTGCTATCTGGGGGCCTACAGGTACCTCAATCAGGGCATTCTTCAAGGGCACTGATACTTGGAAACAGGAAAACGTACTAAGACAGGAGACCGCCAAGCTTTTGGCATCTACTGCAACGGCTAGGGGGGTAGCAGAGTACAGCTCTCTTCCTGCAGGGCCTCAAAAGGACCCTAAAACGACTCAGGTTTCCATTATTGGCAACGTACCAGTTTCTTTTGGAGTGTATCTATACCAAGCAATAGGGCTCCATCAGGGATGGAGATCTATTCCTTCCAAAGGAGACGAAGGCACACGTTTGCCATTGCACCATCTGATTCTGGCCATTGTTTGTGCTCTGACGGCCGGAATTCTGGGTGGCCTCCTCGGTGTAGGCAGTGGATTTGTAATGGGTCCTTTATTTATGGAACTAGGTATCGCTCCTCAGGTGGCAAGTGCCACAGCCACGTTAGGAATGATGTTCTCTGCATCTTTGTCTGTTGTACAGTATTACCTCCTGAACCGTTTTCCTCTTCCTTACGCTCTGTATCTTACATCTGTGGCGGCCATTTCAGCGTACATAGGACAGTATATCATTGACAGCCTGGTTAAATTCTTTGGCAGGGCGTCTCTGATTATCTTCGTTGTTGCCTTCACTATATTTGTTAGTACGATTGCGTTGGGTGGTATTGGCGTATCGGACATGATTGAAAGGATTCAGCGGAACGAATACATGGGATTCGACGACTTCTGCAAATAA 1239 0.4689 MAPMIRTDCQVWKNMSMLVFFTLLLASVFVSAHGRETSAGSNETDPFSTYMVNAMHFLWNPAQSGYHHVWPEMKFGWPIIVGTLIGCLGGAFGSVGGVGGGGFFVPTLILIIGFDAKSATAISKCMITGAGISTVYFNLKLRHPTFDIPLIDYNLVLLMLPVILLVVFAIWGPTGTSIRAFFKGTDTWKQENVLRQETAKLLASTATARGVAEYSSLPAGPQKDPKTTQVSIIGNVPVSFGVYLYQAIGLHQGWRSIPSKGDEGTRLPLHHLILAIVCALTAGILGGLLGVGSGFVMGPLFMELGIAPQVASATATLGMMFSASLSVVQYYLLNRFPLPYALYLTSVAAISAYIGQYIIDSLVKFFGRASLIIFVVAFTIFVSTIALGGIGVSDMIERIQRNEYMGFDDFCK 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0543 412 PANTHER CEREBLON 27 411 - -
Lele03g0543 412 Pfam Sulfite exporter TauE/SafE 276 380 IPR002781 GO:0016020
Lele03g0543 412 Pfam Sulfite exporter TauE/SafE 19 168 IPR002781 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0543 Lele-ChrLele03 3218833 3230473 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0505 25 3183436 3186597 Lele03g0543 03 3218833 3230473 CCT
Lele03g0543 03 3218833 3230473 Lele03g0543 03 3218833 3230473 ECH
Lele01g0534 01 3195237 3197847 Lele03g0543 03 3218833 3230473 hybridization
Lele02g0527 02 3176233 3178883 Lele03g0543 03 3218833 3230473 hybridization