Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0539 ATGGCGTCCCACGAATACGATGATGTGCGTGCCGGATACGACGACCACCGACAGCCACCATCGCAATCTCAAGACCTGGGCTATGATCCGAATTTCGTACCTGATTCTGTCAAGTCATTTGTTGTCCACCTCTACCGCCACATCCGAGAGAAAAATGTGTACGAGATCCACCAGATGTACGAGAACTCTTTCCAAACTCTCTCGGAGCATCTCTTCAAGGATACTCCGTGGCCTCCTGTGGACGCTGTCGCTCACTACGTTGACAATGATCATGTGTTTTGCCTCCTGTACCGCGAGATGTGGTTTCGTCACCTCTATGCTCGGCTCACGCCAACCCTTAAGCAGAGGATAGATTCCTGGGACAATTATTGCAGCCTCTTTCAGGTTGTGTTGCATGGAGTTGTCAATATGCAGCTACCCAACCAGTGGTTGTGGGATATGGTGGATGAGTTTGTCTACCAGTTTCAGAGCTTCTGTCAATATAGAGCTAAGATGAAGAACAAAACCGAGCAGGAAATTGCGATTTTGAGGCAGTATGATCAGGCAACAGATAGGAAGTTCCTGACATGCAATAAATTCATCTCGAAACAATTCGAGTTAGCTGAGCTATTGTTCGCCCGTGCTGGTTGCCTAACAGCTTGGAACGTTTATGGTGTCCTCAACTTCTTGCAAGCTCTTGTCGAGAAGTCCATGATTATTCAGATTCTTGAGCAAGAAAAAGAAGGCCTGGAACAGTTTACTGCTACTGATGGGTATGATTACAACGGAGGGAGTAATGTCTTAAAGGTGTTGGGGTATTTCAGCATGGTAGGATTGCTGCGAGTTCATTGTCTTTTAGGTGATTATCATACAGGTCTCAAGTGCTTGCTTCCTATTGATATTAGTCAACATGGCGTTTACATCAGTGTTATTGGAAGCCACATTACCGCCATATATCATTATGGTTTTGCCAATCTTATGTTGCGGAGGTATGTGGAAGCAATTCGCGAATTTAACAAAATTCTCTTGTATATCTATATGACAAAACAGAATCATCAGAAATCCACACAGTATGAACAGATACTGAAGAAGAATGAGCAGATGTATGCCTTGCTGGCTATTTGCCTGTCGCTCTGCTCCCAAAACAGGCTTGTTGATGAAACTGTGAACTCTCAGTTGCGGGAGAAGTATGGTGAAAAGATGATTAGAATGCAAAGATATGACGATGAGGCTTTTGCTATCTATGATGAGCTCTTTTCGTATGCATGTCCCAAATTCATTACCCCATCAGCACCTAGTTTTGAGGAGCTTCTAGTTAATTACAACCAGGATGCCTACAGACTTCAGTTGAAACTATTCCTTTATGAAGTGAAGCAGCAACAATTGTTAACAGGTGTCCGGACCTTCTTGAAAGTCTATTCAACAATCTCTCTTGCGAAACTTGCTAGCTACATGGAAGTAGATGAAGCCAATTTAAGGACTATTTTGATGACATACAAACATAAAACTCATGCCGTTGATAGTGATGGAAAAGTTATATCCAATGCTGATGTGAATTTCTACATTGACGATGATATGGTTCACGTTGACGAGTCAAAGCCCCCCAAGCGATATGGGGATTACTTCTTGCGTCAGATAGTCAAGCTTGAAGGCGTTATCAATGAGATAGACGGTATAAAGCGGGAATAG 1668 0.4329 MASHEYDDVRAGYDDHRQPPSQSQDLGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYENSFQTLSEHLFKDTPWPPVDAVAHYVDNDHVFCLLYREMWFRHLYARLTPTLKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIAILRQYDQATDRKFLTCNKFISKQFELAELLFARAGCLTAWNVYGVLNFLQALVEKSMIIQILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQHGVYISVIGSHITAIYHYGFANLMLRRYVEAIREFNKILLYIYMTKQNHQKSTQYEQILKKNEQMYALLAICLSLCSQNRLVDETVNSQLREKYGEKMIRMQRYDDEAFAIYDELFSYACPKFITPSAPSFEELLVNYNQDAYRLQLKLFLYEVKQQQLLTGVRTFLKVYSTISLAKLASYMEVDEANLRTILMTYKHKTHAVDSDGKVISNADVNFYIDDDMVHVDESKPPKRYGDYFLRQIVKLEGVINEIDGIKRE 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0539 555 MobiDBLite consensus disorder prediction 1 29 - -
Lele03g0539 555 Pfam RNA polymerase I-associated factor PAF67 115 541 IPR019382 GO:0003743|GO:0005737|GO:0005852
Lele03g0539 555 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 22 544 IPR019382 GO:0003743|GO:0005737|GO:0005852
Lele03g0539 555 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 212 550 IPR019382 GO:0003743|GO:0005737|GO:0005852
Lele03g0539 555 ProSiteProfiles PCI domain profile. 327 529 IPR000717 -
Lele03g0539 555 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0539 Lele-ChrLele03 3201174 3205110 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0539 03 3201174 3205110 Lele03g0539 03 3201174 3205110 ECH
Lele01g0531 01 3177936 3181857 Lele03g0539 03 3201174 3205110 hybridization
Lele02g0522 02 3151983 3155661 Lele03g0539 03 3201174 3205110 hybridization