Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0505 ATGGGATCTCAGGATTCGCAAATGAAGATCGTCCATGGCGATTTTGGTTACATACTCGAGGACGTTCCTCACTTCAATGACTATATTCCTAGTCTTCCCACATACCCAAATCCGCTGAGATCTAACCCGGCTTATTCAGTTGTGAAGCAGTATTTTGTTCACGTCGATGACACTGTTCCTCAGAAGGTTGTCGTTCACAAGGATAGTCCAAGGGGTGTACATTTTCGACGTGCTGGACCCCGCCAAAAGGTATATTTCAAGTCAGATGATGTGCATGTGTGCATTGTTACATGCGGTGGTCTTTGCCCTGGACTCAACACAGTGATAAGGGAAATAGTCTGTGGTCTATCTCACATGTACGGGGTCAACAAAATCCTTGGTATAGATGGGGGTTACAGAGGTTTCTACTCCAAGAACACCATTACTTTAACACCCAAGGTGGTCAATGATATCCATAAGCGCGGGGGTACCATTCTTGGGACATCACGAGGAGGGCATGATACTTCCAAGATAGTTGACAGCATACAGGATCGTGGAATTAACCAGGTTTATATTATTGGAGGAGATGGAACCCAAAGGGGAGCAGCTGTGATTTATGAGGAAATTAGAAGACGGGGTCTCAAAGTGGCAATTGCTGGAATTCCTAAAACCATAGATAATGACATCCCGGTTATTGACAAGTCCTTTGGTTTTGATACTGCTGTTGAGGAGGCTCAACGTGCCATTAATGCAGCACATGTTGAGGCTGAAAGTATTGAGAATGGGATTGGTGTTGTAAAGCTGATGGGACGCTACAGCGGTTTCATTGCAATGTATGCTACTCTTGCTAGTAGAGATGTGGACTGTTGCTTGATTCCAGAGTCACCCTTCTACCTTGAGGGAAAGGGTGGACTTTTTGAATTTATTGAGAAAAGGCTAAAAGAAAATGGACATATGGTCATAGTCATAGCTGAGGGAGCAGGACAAGATCTCCTTACTGAAAGTATGCAGGCTGCGAACCAGAAGGATGCTTCTGGAAACAAACTGCTTCAAGATGTTGGTCTATGGATATCTCAGAGGATTAAGGATCATTTTGCAAGGCAAAATAAGATGACTATTACTCTCAAATATATAGATCCTACTTACATGATCCGGGCAATTCCAAGCAATGCATCAGACAATGTCTACTGCACACTTCTTGCTCAGAGTGCAGTTCATGGTGCAATGGCTGGGTACACTGGATTCACAGTTGGGCTGGTCAATGGCAGACATACTTATATTCCATTCAACAGAATCACTGAGAGGCAGAACAAGGTTGTGATAACAGACAGAATGTGGGCAAGACTTCTTTCTTCGACCAACCAGCCGAGTTTTTTGAGCCCCAAAGATTTTAATGAAGCCAAAAAGGAAAAGCCGCCTCGTACTCAGTTGTTAGGCGGTGACAACTGCGAAGATGGACAGCAGTCAGAAAAACAAGCTAACACGAATAATGGGACAAACTAA 1482 0.4399 MGSQDSQMKIVHGDFGYILEDVPHFNDYIPSLPTYPNPLRSNPAYSVVKQYFVHVDDTVPQKVVVHKDSPRGVHFRRAGPRQKVYFKSDDVHVCIVTCGGLCPGLNTVIREIVCGLSHMYGVNKILGIDGGYRGFYSKNTITLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGGDGTQRGAAVIYEEIRRRGLKVAIAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIEKRLKENGHMVIVIAEGAGQDLLTESMQAANQKDASGNKLLQDVGLWISQRIKDHFARQNKMTITLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTVGLVNGRHTYIPFNRITERQNKVVITDRMWARLLSSTNQPSFLSPKDFNEAKKEKPPRTQLLGGDNCEDGQQSEKQANTNNGTN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0505 493 FunFam ATP-dependent 6-phosphofructokinase 87 277 - -
Lele03g0505 493 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 1 4 459 - -
Lele03g0505 493 PRINTS ATP-dependent phosphofructokinase family signature 212 229 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lele03g0505 493 PRINTS ATP-dependent phosphofructokinase family signature 230 248 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lele03g0505 493 PRINTS ATP-dependent phosphofructokinase family signature 308 320 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lele03g0505 493 PRINTS ATP-dependent phosphofructokinase family signature 251 267 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lele03g0505 493 PRINTS ATP-dependent phosphofructokinase family signature 179 195 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lele03g0505 493 PRINTS ATP-dependent phosphofructokinase family signature 95 114 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lele03g0505 493 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 22 452 IPR012004 GO:0003872|GO:0005524|GO:0006096
Lele03g0505 493 PIRSF ATP_PFK_TP0108 1 456 IPR012004 GO:0003872|GO:0005524|GO:0006096
Lele03g0505 493 Coils Coil 235 255 - -
Lele03g0505 493 SUPERFAMILY Phosphofructokinase 26 456 IPR035966 GO:0003872|GO:0006096
Lele03g0505 493 MobiDBLite consensus disorder prediction 474 493 - -
Lele03g0505 493 Pfam Phosphofructokinase 93 399 IPR000023 GO:0003872|GO:0006096
Lele03g0505 493 Gene3D - 88 277 - -
Lele03g0505 493 MobiDBLite consensus disorder prediction 450 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0505 Lele-ChrLele03 2966327 2971442 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0496 01 2944052 2949002 Lele03g0505 03 2966327 2971442 hybridization
Lele02g0482 02 2887546 2904844 Lele03g0505 03 2966327 2971442 hybridization