Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0357 ATGACCTCTCTGAAACAGACCCAGAACTCGATTCACAGCTGGAAAATGAAGTATCGCAACTCCAATAAGGTTTCTACCAAATGGGTTCCCATTGTCTCTGTCGTTTCTTTCCTCCTGGGTATGCTCATCGCAAGCAGGAGTTGGGAACGGACTGAATCAAACGGCCATCTTGTTTCGCTGCATCGGAATAATGAAGTGCAAGTCGTCTCCAAGGAGTCAACTACTGAGAAGAAGCCTGTACGAAATCAGGATGTAATAAGCGAAGTTTACAGAACCCACGAAGCCATTCAATCTCTAGACAAACAAGTTGCCATGCTTCAAATGGAACTAGCAGCAGCCAGGAGTTCTCGAGAAAGGGGGGTCTCAGATGGCTCTGCGGCGACCAACTCTGAGAAATCTACGGAAACATCTCCCAGGAAGAAGGCGTTTATAGTGATTGGCATAAACACAGCTTTCAGTAGCAGGAAGCGTAGAGATTCAGTTAGGGAGACTTGGATGCCACAAGGGGAACAGCTCCTTCGATTGGAACGTGAGAAGGGAATTATCATCAGATTCATGATTGGCCACAGTATTCTTGATCGAGCTATTGATTCAGAAGATGCCCAGCACCACGACTTCCTCCGGCTGGAACATGTTGAAGGGTATCATGAACTGTCTGCAAAGACAAAGATTTTCTTCTCTACCGCAATTGCTAAATGGGATGCAGATTTTTATGTCAAGGTGGATGATGATGTCCATGTCAACTTAGGTGTCTTGGCAACAACTCTTGCTCGTCATCGTTCAAAACCAAGAGTCTATATTGGGTGTATGAAATCTGGACCTGTTCTTTCCCGAAAGGATGTCAAGTATCATGAGCCTGAGTTCTGGAAGTTTGGAGAAGAAGGGAACAAATACTTCCGACATGCCACTGGGCAGATATACGCACTTTCTAAGGATCTGGCTACCTACATTTCTATTAACCAATTTGATCAATGGGGAAAAAGGTTATTTTGCATTACTAGATTGAATTCTTTAGCATCTAATGATGGAAGTACACATTGTGAGTGCAGGCCAATATTACACAAGTATGCTAATGAAGATGTCTCGCTTGGTTCCTGGTTCATCGGTCTTGAAGTCGAGCACATTGATGACCGCAATATGTGCTGTGGGACTCCTCCAGATTGCGAGTGGAAGGCGCAGGCAGGTAACACATGCGTTGCTTCATTTGATTGGAGCTGCAGTGGAATCTGCAAATCAGTGGAGAAGATTAAATATGTCCACCAAAAATGTGGTGAAGGAGAAGGAGCCGTTTGGAATGCTTTAGCTTAA 1308 0.4465 MTSLKQTQNSIHSWKMKYRNSNKVSTKWVPIVSVVSFLLGMLIASRSWERTESNGHLVSLHRNNEVQVVSKESTTEKKPVRNQDVISEVYRTHEAIQSLDKQVAMLQMELAAARSSRERGVSDGSAATNSEKSTETSPRKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLRLEREKGIIIRFMIGHSILDRAIDSEDAQHHDFLRLEHVEGYHELSAKTKIFFSTAIAKWDADFYVKVDDDVHVNLGVLATTLARHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYALSKDLATYISINQFDQWGKRLFCITRLNSLASNDGSTHCECRPILHKYANEDVSLGSWFIGLEVEHIDDRNMCCGTPPDCEWKAQAGNTCVASFDWSCSGICKSVEKIKYVHQKCGEGEGAVWNALA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0357 435 Gene3D - 131 380 - -
Lele03g0357 435 MobiDBLite consensus disorder prediction 116 138 - -
Lele03g0357 435 Pfam Domain of unknown function (DUF4094) 25 116 IPR025298 -
Lele03g0357 435 Coils Coil 96 116 - -
Lele03g0357 435 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 101 376 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele03g0357 435 Pfam Galactosyltransferase 156 320 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0357 Lele-ChrLele03 2042541 2045216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0357 16 434 Glycosyltransferase AT1G77810 67.447 0.0 574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0357 03 2042541 2045216 Lele03g0357 03 2042541 2045216 ECH
Lele01g0348 01 2038706 2041380 Lele03g0357 03 2042541 2045216 hybridization
Lele02g0344 02 1981689 1984451 Lele03g0357 03 2042541 2045216 hybridization