Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0343 ATGGCGGGCGGTGGAAAGGTCTCCTTCAAAGTTACCCTAACCTCCGATCCTAAGTTACCCTTCAAAGTGTTTAGCGTTCCAGAGGCTGCCCCCTTTACTGCCGTCCTCAAATTCGCAGCTGAAGAATTCAAAGTGCCCCCTCAGACCAGCGCAATTATCACCAACGATGGTGTTGGGATAAATCCACAGCAGAGTGCAGGTAATGTTTTCCTGAAGCATGGGTCAGAGTTACGGCTGATTCCGCGGGATAGGGTTGGAGCCTCTGGGACGTTGCTGAATGTCTGA 285 0.5158 MAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGASGTLLNV 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0343 94 PANTHER UBIQUITIN-FOLD MODIFIER 1 2 89 IPR005375 GO:0071569
Lele03g0343 94 SUPERFAMILY Ubiquitin-like 2 86 IPR029071 -
Lele03g0343 94 CDD Ubl_UFM1 7 81 - -
Lele03g0343 94 PIRSF Ufm1 1 88 IPR005375 GO:0071569
Lele03g0343 94 Gene3D - 4 87 - -
Lele03g0343 94 FunFam Ubiquitin-fold modifier 1 3 88 - -
Lele03g0343 94 Pfam Ubiquitin fold modifier 1 protein 6 80 IPR005375 GO:0071569
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0343 Lele-ChrLele03 1932931 1935166 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0343 03 1932931 1935166 Lele03g0343 03 1932931 1935166 ECH
Lele01g0336 01 1936636 1938871 Lele03g0343 03 1932931 1935166 hybridization
Lele02g0330 02 1860611 1863297 Lele03g0343 03 1932931 1935166 hybridization