Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0325 ATGGCAGAGGAGGCACCGGAAACCGAGACTCCTAAGAAGGATACTAAGGCGGATGCTCGCGATATTGAGTCTCAGATTCAGACTGCTATGCTCTTTCGCGTTGCTCACTTCAAGGAACAAGCCGATTCTTTGACATTTGAGGGGGTTCGTAGATTGCTTGAGAAAGATTTGGGGTTGGAGCCATATGCATTAGACGTGCATAAGAGATTTGTCAAGCAATGCTTGCTGAAGAGCTTGGAAGGAGTTGGAGATGATAAGTCTCCAAAGATATCTGGGGATACAGGGGAAAAAGGTTCAAGTACACAAGAGAAAGAAGGATCAACTGAAGAAATCCATTCAAAGAAGGATCTAAAGAATTGTTGTACTGACAATGAAGATAAAATGGAAGATTCTCCAGTATTGGGTCTGCTAAACGAAGAAAAATCAGTTAAACTTGAAACTGAGGAAGCTGAAGGCAATGGAAAAAATGCAATTCCAAGTGATACCATGATTAGGAAAGCCATTAGAAAAAGATCGTCTTATGTCAGAGCCAATTCAGAGAAAGTCACAATGGCGGGTCTTCGTCGACTATTGGAAGGAGATCTTAAACTTGAGAAATTTTCTCTTGATCCCTATAAGAAACTTATAAGTCGACAGCTAGAGGAGGTGTTAAAATCTTGTGAAGTTTCAGAACCTGCAAAGAGTGCTAAGAAAATTGTTAAGAAAAAGCCTGATGCCAAACCAACTAAAAAGGTCAGTAGTGAAGAGAGCTCTGATGCCTCAGACCAGCATGTTGAAGAGGATGATGAACAGGAAGATGAAATTAAACCTAGAAAAAGAAGTATTCCAAAAGGGAAGTTGCAGAACTCCCTTGAACCTAAAAAGCGGAAAGGATCCCCAGAGGAGACTGAATTATCTGCTAAGAAAAGGATCAAGGCAGCTAAAAAAGCCTCAGAAGACAGAGGAGATGCAGAAGATTCTGGAAAAGACTCTGAAGATGATCATTCCCAATCATCACCAGAGAAAATTGCAAAGAAGAAAGAAGTTTCAACTCCTGCGTATGGCAAACAAGTGGAGCACCTTAAATCTGTTATTAAAGCATGTGGAATGAGTGTTCCACCCGTTATCTATAGAAGAGTCAAGCAGGTGCCTGAAAATAAGCGGGAAGCCCAGCTAATAAAGGAGTTGGAAGAAATACTGTCTAGAGAGGGATTGTCTTCAAATCCATCTGAAAAAGTAATTAAGGAAGTAAAACGGAAGAAGGAAAGAGCAAAGGAACTTGAGGGTATTGATGTGAGCAATATCGTGTTAAGTTCACGCAGACGATCAACAACTAGTTTTGCTGCTCCTCCGAAGGCCAAAGAACCAGTTGAAACAAAAACTAAGGGTGATGATGCTGAGAATAGTGATGATGACAATGATGATGAAAGCAATGACGATGAAGAGGACGAAGAAGATGAGGAAGAAGGGAACAGTGGTGATGATGAGGATGGAAGTCAAAGTGAGGAACCTAATGAGGATGAAGAGGACAGCGATTAG 1518 0.4117 MAEEAPETETPKKDTKADARDIESQIQTAMLFRVAHFKEQADSLTFEGVRRLLEKDLGLEPYALDVHKRFVKQCLLKSLEGVGDDKSPKISGDTGEKGSSTQEKEGSTEEIHSKKDLKNCCTDNEDKMEDSPVLGLLNEEKSVKLETEEAEGNGKNAIPSDTMIRKAIRKRSSYVRANSEKVTMAGLRRLLEGDLKLEKFSLDPYKKLISRQLEEVLKSCEVSEPAKSAKKIVKKKPDAKPTKKVSSEESSDASDQHVEEDDEQEDEIKPRKRSIPKGKLQNSLEPKKRKGSPEETELSAKKRIKAAKKASEDRGDAEDSGKDSEDDHSQSSPEKIAKKKEVSTPAYGKQVEHLKSVIKACGMSVPPVIYRRVKQVPENKREAQLIKELEEILSREGLSSNPSEKVIKEVKRKKERAKELEGIDVSNIVLSSRRRSTTSFAAPPKAKEPVETKTKGDDAENSDDDNDDESNDDEEDEEDEEEGNSGDDEDGSQSEEPNEDEEDSD 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0325 505 SMART CHZ_2 414 449 IPR019098 -
Lele03g0325 505 MobiDBLite consensus disorder prediction 239 253 - -
Lele03g0325 505 MobiDBLite consensus disorder prediction 425 505 - -
Lele03g0325 505 Pfam Histone chaperone domain CHZ 415 447 IPR019098 -
Lele03g0325 505 MobiDBLite consensus disorder prediction 282 346 - -
Lele03g0325 505 PANTHER HIRA-INTERACTING PROTEIN 3 1 504 IPR037647 -
Lele03g0325 505 MobiDBLite consensus disorder prediction 219 349 - -
Lele03g0325 505 MobiDBLite consensus disorder prediction 461 505 - -
Lele03g0325 505 MobiDBLite consensus disorder prediction 82 131 - -
Lele03g0325 505 MobiDBLite consensus disorder prediction 1 20 - -
Lele03g0325 505 Coils Coil 403 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0325 Lele-ChrLele03 1809084 1813254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0325 17 447 EF-hand Containing Proteins AT1G44780 44.828 1.47e-91 285
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0325 03 1809084 1813254 Lele03g0325 03 1809084 1813254 ECH
Lele01g0317 01 1815006 1819172 Lele03g0325 03 1809084 1813254 hybridization
Lele02g0312 02 1746675 1750761 Lele03g0325 03 1809084 1813254 hybridization