LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele03g0292	ATGGACCAGTTTGGTGTGTTAACTGCAAGTTATGGGTTGAAGCCACAAGGGAAATCGGCTCCTATGGCGTCAGCGAAGCAGGCCACAAATTATGGTGGCTCGCAAACCGGAAATTTCGGCACCAATACAAGTCTACACTCCAAATCTGCCCAATACGGATCAAGATCTCCTCAACATCCCACTTTTGATTATGATTCTTTTGTCGACGATCATAATGGGGTTTTTCGATCTACTGGCAACAAGAAAACCCAGCATTTTGGGAGTCTTGATGATGAGATTGATATTTTTGGTGGACCAAATAAACCAGCCTCTCAGTCGAATTCTGGTGGGGGCGATTCATTTGGTTTTGATTCAATATTCACGGGGTCGAATAATTCGGTTTCAACGCCTTCAGCATCGAATAGTTATGTTGATGACATATTTGGTGGAATACCTGACCTTAAGAGCTCGATTCCTGCCAAAACAGGGCACTGCCTTCCGGCATTTCCTTTGTCAACTAAGCAGCATGTTCCTAATGTCGATTTACTGGATAAGATTAGTTCACTGCACTCAAAATCCAAAACTTCTAACAAGAAAGGATCTGAAGGGCTCGCCAAGCCAGCACCTGAGTTTGATGACTTGATACCTGGATTTGGTGGGAGCAGTATTACAAATAATAGAGCACCTACCAAGGTGAATAAGCCTAGCAAGCAGACTGTAACTTCACATGATGACCCGTTTTCGATATTTGAAACAACTTCGACAAGTGAGTCTTCAGGATCATTCCTGGACCCTCTAGAACAGATGAGTAGGTTAAATAATTCCGGAGGCACAAGAGGCAGCTCCAATACCCCATCATTGAGACCTCCACCAAAACCAACTAATGGTTTAAATATAAATAAAGTTAACAGCTCAGTTGTATCATCATCAATAGATGAACTTGAGGAATTTGCCATGGGCCAGGTGCGGAGTAATTCTAGAGTCCATGTTCATGCTCGTGAAAATAAACAAAACTCAGTGGCTAAGACAAACAAAACTACTGGAGCTCCTGATTCTGCAAAAGCGAGTCAAATAAAAACTGTGGATGATCTAGAATCCTTTTTCAGCACGGGTTCTCGATCAAGCAGTGCACCAAAGTCAAGGGCCACAACCTTGGTTCAAACATTTGATGGCCAAATGCAAAACAAAAGGAGATCTGAAGTGCCTCAAAGAGTGCCATCTGGATCCACAGCCAGTATGAAGAAATCTTCATTGATAGCATCGTTTGATGACCTTTCACTAATTTTTGATTCCTCTTCATCATCCAAATTCGAGGAAGTTGATGGGGAACCTGAGGAAAGACGAAAAGCAAGACTAGGACGTCATCAAAGGACAGAGGAGCGAGCGGCAAAAGCAGTGGCTGATATGAAGCAGCGGAACCGACAAACCACAATGGAACAAGAAGAGAGGCGTAGAATCGCTGAAACTCTGGATGCTGAAATAAAGCGATGGGCTGCAGGGAAAGAAGGCAATATGCGGGCTTTGCTATCAACATTACATTATGTGCTTTGGCCTGAATGCGATTGGCAGCCAGTGTCTTTGACTGATGTTATTACTTCTACTTCAGTCAAAAAAGTTTATAGAAAAGCAACATTATGCGTTCACCCCGATAAAGTTCAACAGAAAGGTGCTACTCTTGAACAGAGATATATTGCGGAGAAGGTTTTTGACATCCTCAAGGAAGCTTGGAACAAGTTCAATGCAGAAGAACTTTCTTAG	1737	0.4289	MDQFGVLTASYGLKPQGKSAPMASAKQATNYGGSQTGNFGTNTSLHSKSAQYGSRSPQHPTFDYDSFVDDHNGVFRSTGNKKTQHFGSLDDEIDIFGGPNKPASQSNSGGGDSFGFDSIFTGSNNSVSTPSASNSYVDDIFGGIPDLKSSIPAKTGHCLPAFPLSTKQHVPNVDLLDKISSLHSKSKTSNKKGSEGLAKPAPEFDDLIPGFGGSSITNNRAPTKVNKPSKQTVTSHDDPFSIFETTSTSESSGSFLDPLEQMSRLNNSGGTRGSSNTPSLRPPPKPTNGLNINKVNSSVVSSSIDELEEFAMGQVRSNSRVHVHARENKQNSVAKTNKTTGAPDSAKASQIKTVDDLESFFSTGSRSSSAPKSRATTLVQTFDGQMQNKRRSEVPQRVPSGSTASMKKSSLIASFDDLSLIFDSSSSSKFEEVDGEPEERRKARLGRHQRTEERAAKAVADMKQRNRQTTMEQEERRRIAETLDAEIKRWAAGKEGNMRALLSTLHYVLWPECDWQPVSLTDVITSTSVKKVYRKATLCVHPDKVQQKGATLEQRYIAEKVFDILKEAWNKFNAEELS	578

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele03g0292	578	FunFam	Auxilin-related protein 1	448	577	-	-
	Lele03g0292	578	SUPERFAMILY	Chaperone J-domain	424	576	IPR036869	-
	Lele03g0292	578	MobiDBLite	consensus disorder prediction	212	278	-	-
	Lele03g0292	578	MobiDBLite	consensus disorder prediction	184	293	-	-
	Lele03g0292	578	MobiDBLite	consensus disorder prediction	1	65	-	-
	Lele03g0292	578	MobiDBLite	consensus disorder prediction	332	347	-	-
	Lele03g0292	578	MobiDBLite	consensus disorder prediction	385	405	-	-
	Lele03g0292	578	MobiDBLite	consensus disorder prediction	22	61	-	-
	Lele03g0292	578	MobiDBLite	consensus disorder prediction	429	455	-	-
	Lele03g0292	578	PANTHER	AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED	347	576	-	-
	Lele03g0292	578	MobiDBLite	consensus disorder prediction	325	349	-	-
	Lele03g0292	578	Gene3D	DnaJ domain	449	577	IPR036869	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele03g0292	Lele-ChrLele03	1634353	1638894	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele01g0290	01	1645267	1650068	Lele03g0292	03	1634353	1638894	hybridization
	Lele02g0277	02	1580671	1585517	Lele03g0292	03	1634353	1638894	hybridization