Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0135 ATGGAACGAGGGAAGCAAGGAGGAGTGGTGCTGGCAAAGGTGTCGCCTCAACAGCTTCAGAATCCCATACAGCTGATCCAAACGCGTTTCAAAGAGTTGGAGAATGGCTTCAAGCTGTGGCTCTCCAAGCAGTCTTTACCGGTCGAGGCTGCTGTCGTCACTGCTACCAGCGCCGCCCAAGGTGCTGCTATAGGTGCTTTTATGGGCACTCTCACTAACGATGCTTCTTCCCCTTTTCCAACGCCGCCCGAGGCTTCTCTCAACCCTCAAGCCATGGCCTCTCTTAAGCAAGCTCAGGCTCTTTCTGGGGGTCCTTTGGTGCAAGCTCGCAACTTTGCTGTCATGACAGGAGTGAATGCTGGTATATCCTGCTTCTTGAAAAGATTGAGGGGGAAAGAAGATGTCCAGTCCAGCATGGCAGCGGCTTTTGGGTCTGGGGCCATGTTTTCATTGGTAAGTGGCATGGGTGGACCAAATCAAGCAGCAAATGCAGTCACTTCTGGACTTTTCTTTGCTCTTGTTCAAGGTGGACTCTTCCAGTTAGGACAAAAGTTCTCTCAACCACCATCTGAAGATATTCACTATTCCAAGACGAGACACATGTTGCACAACCTTGGCCTTCAGAGTTACGAGAAGAATTTCAAGAGAGGCTTGTTGACAGACAACACGTTGCCTTTACTCACGGACAGTGCTCTCAGAGATGTGAAAATCCCTCCTGGACCTAGGCTGTTGATTCTTAATCACATCCAGAGGGACCCAGATCTGAGAGGGAAGCGAGCAGGCCGGAATTAA 792 0.5038 MERGKQGGVVLAKVSPQQLQNPIQLIQTRFKELENGFKLWLSKQSLPVEAAVVTATSAAQGAAIGAFMGTLTNDASSPFPTPPEASLNPQAMASLKQAQALSGGPLVQARNFAVMTGVNAGISCFLKRLRGKEDVQSSMAAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFQLGQKFSQPPSEDIHYSKTRHMLHNLGLQSYEKNFKRGLLTDNTLPLLTDSALRDVKIPPGPRLLILNHIQRDPDLRGKRAGRN 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0135 263 CDD SAM_superfamily 200 251 - -
Lele03g0135 263 SUPERFAMILY SAM/Pointed domain 194 253 IPR013761 -
Lele03g0135 263 FunFam mitochondrial import inner membrane translocase subunit TIM22-like 199 258 - -
Lele03g0135 263 Gene3D - 192 256 IPR013761 -
Lele03g0135 263 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 18 238 IPR039175 GO:0042721|GO:0045039
Lele03g0135 263 Pfam SAM domain (Sterile alpha motif) 202 251 IPR001660 GO:0005515
Lele03g0135 263 Pfam Tim17/Tim22/Tim23/Pmp24 family 54 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0135 Lele-ChrLele03 737831 740374 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0135 03 737831 740374 Lele03g0135 03 737831 740374 ECH
Lele01g0129 01 767789 770327 Lele03g0135 03 737831 740374 hybridization
Lele02g0128 02 744693 747856 Lele03g0135 03 737831 740374 hybridization