Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1436 ATGGAGAATACTGGAAGCAGTGCCTTTTTGAGGAACAGAAGGTTGGAGAGCTTTCTGAACACAAGTTCTGGTCAAAGGGTGGAAGAGAAAGAGACTCCTAAAGTTTCATCAGTGAAAGAAGAATCATCAGAAAGAAGGCTAAAGACCGAGAACATACTTTCGAATTACGATGATGAAGGGTTGTTGTTGGATATCATATCATGGATAAGAATTGTCATATGTTTTGTGTCTATGATGGTTACAACATTCATATGGGCATTGATTATGCTTGTTCTTATTCCATGGCCTTATGAGAGGATTAGGCAAGGAAACATTTATGGCCATGTGACTGGTAGAATGCTGATGTGGATTCTTGGCAATCCCATAAAGCTTGAAGGTTCTGAGTATGCTAACAATAGGGCCATTTATATCAGTAATCATGCCTCTCCAATAGACATATTTCTTATAATGTGGTTGACTCCAACCGGTACTGTAGGAATTGCGAAGAAGGAGATAATATGGTATCCTTTATTTGGTCAACTTTATGTTTTGGCGAACCACCTTCGTATAGACCGATCTAACCCAACTGTAGCTATTGAGTCCCTAAAGGAGGCGGCTCGTGCGATCGTGACAAAAAACCTATCCCTGATTATTTTTCCGGAGGGCACAAGGTCCAAAAATGGACGGCTACTTCCTTTCAAAAAAGGTTTCATTCATTTGGCAATACAATCACGCCTTCCTATTGTGCCGATGGTTCTAACAGGCACTCATCGAGCATGGAGGAAAGGCAGCTTACATGTTCGTCCGGCGCCTATTGCTGTCAAGTATCTTCCTCCGATAAGTACTGAAAATTGGACGGTTGATAAGATTGATGATTACGTCGAAAAGGTACATAACTTGTATGCTGAACACCTTCCAGAGAATCAGAGACCTTTGCCTTGA 921 0.4137 MENTGSSAFLRNRRLESFLNTSSGQRVEEKETPKVSSVKEESSERRLKTENILSNYDDEGLLLDIISWIRIVICFVSMMVTTFIWALIMLVLIPWPYERIRQGNIYGHVTGRMLMWILGNPIKLEGSEYANNRAIYISNHASPIDIFLIMWLTPTGTVGIAKKEIIWYPLFGQLYVLANHLRIDRSNPTVAIESLKEAARAIVTKNLSLIIFPEGTRSKNGRLLPFKKGFIHLAIQSRLPIVPMVLTGTHRAWRKGSLHVRPAPIAVKYLPPISTENWTVDKIDDYVEKVHNLYAEHLPENQRPLP 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1436 306 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 69 300 - -
Lele01g1436 306 CDD LPLAT_AGPAT-like 112 288 - -
Lele01g1436 306 SMART plsc_2 134 249 IPR002123 GO:0016746
Lele01g1436 306 MobiDBLite consensus disorder prediction 27 42 - -
Lele01g1436 306 MobiDBLite consensus disorder prediction 21 42 - -
Lele01g1436 306 Pfam Acyltransferase 123 246 IPR002123 GO:0016746
Lele01g1436 306 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 71 300 - -
Lele01g1436 306 TIGRFAM AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 129 246 IPR004552 GO:0003841|GO:0008654|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1436 Lele-ChrLele01 8859195 8862092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1436 71 257 Acyl Lipid Metabolism Gene Families AT4G30580 30.964 1.76e-18 82.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1436 01 8859195 8862092 Lele01g1436 01 8859195 8862092 ECH
Lele01g1436 01 8859195 8862092 Lele03g1437 03 8753377 8756294 hybridization
Lele01g1436 01 8859195 8862092 Lele04g1707 04 21676068 21678923 hybridization