Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1423 ATGGTGAAGGGGCTGCACGGCCAAAACCTCCCCACCGATGTAACGCAGGTCATTGATCAGTTGGAACGCCACTGCTTGGCTGCCGATGGATCTCTCATCTCCAAGCCATTATACAACGATTTCCAAGTGGTAAATTTCACTCTGTTTCCGACTTCCTGCATTGTTGTTTCTTTGGCGAGAGAGGAAATGTGCCGGGAAAGACTGCGGTACCTGGAAGCCATGGCAATTTACTGTGAGGCCACTGCAATGGTGGAGGAGTATCAGCAAGCCATTTCTGGGTCTAATCTTGGGGGAATTAGAGATACAGCAGGCCCATATCCACAACTTGGATTGAAGAACTCCCCTCAGGTTTATGAGACTCTAGAGCATCGAATGGTTGTGGCTGAAGCAGCTCAAAGACTGAGGCTTCCTCTTCTCTCCAAAGATGGTGAAGTTCATAAGGAAGATATTGAAAAGTTGAGCGTAGCATCTCAAAGCTCGCTTGACAGTACTAGTACCAGCGGCTCAAGCATTAATCCTAATCTTACCACTCCAAGTAGCTTGGTTGGTTGTGTTAATACTGCTCTAGCTGCTACAGATCCAGTAGAACTTGGTGTTGGTGGTGTCCCCAATCGTTTTCTTGGGATTACACCTGCTTATTTGTGGCAATCTCAGCTTCAACAAACACCGTTATCTGTGGTATACCATGACATGACAGAATATCGTATGTCTCTCTCTCGTGAGATAGAGGCTCGATTGAAGGTGAAATGCGACAAGTTAGCAGATGCCTTTGAACTGGATGACATTGATTCTTCACCGTCAGGAAGTCAAACTACAAGGCTTCCAGAAAGATTTGCTTTTAATGTTGATGATCTGAATAATTTGGATTCAGCTCTGCTGGTTTCTTTAGCTGTGGTGAAGTTGTTGATTGAGGAGATTGAAAGAGAAGAAGCAGCACTAAGGGACGACCTTTATTCTGCAGATAGAAAATTTGCTGAATATTATAATGTCTTGGAGCAGATACTTGGGGTGCTTATTAAACTAGTTAAAGATTTGAAGTTGCAGCATCAACACAAATACGATGAGCTGCAGAAGACTTGGCTTTGTAAGAGGTGTGAAACCATGAGTGCAAAATTGAGGGTTCTTGAACATGTTCTTCTGCTTGAAACTTACACTCAGGATTCTATACCTGCCCTTCATAAGATAAGGAAGTATCTTGTTGAGGCTACAGAAGAAGCTTCTATCGCATATAATAAAGCGGTTACTCGTCTCCGTGAGTACCAAGGTGTCGATCCCCACTTCGACAACATTGCAAGGCAATACCATGATATTGTGAAGAAATTGGAGAATATGAAATGGACAATTCAGCAAGTTGAAATGGATCTGAAACGCTTGCCAGATGACCCACGCACATAG 1395 0.4373 MVKGLHGQNLPTDVTQVIDQLERHCLAADGSLISKPLYNDFQVVNFTLFPTSCIVVSLAREEMCRERLRYLEAMAIYCEATAMVEEYQQAISGSNLGGIRDTAGPYPQLGLKNSPQVYETLEHRMVVAEAAQRLRLPLLSKDGEVHKEDIEKLSVASQSSLDSTSTSGSSINPNLTTPSSLVGCVNTALAATDPVELGVGGVPNRFLGITPAYLWQSQLQQTPLSVVYHDMTEYRMSLSREIEARLKVKCDKLADAFELDDIDSSPSGSQTTRLPERFAFNVDDLNNLDSALLVSLAVVKLLIEEIEREEAALRDDLYSADRKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLEHVLLLETYTQDSIPALHKIRKYLVEATEEASIAYNKAVTRLREYQGVDPHFDNIARQYHDIVKKLENMKWTIQQVEMDLKRLPDDPRT 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1423 464 Coils Coil 296 323 - -
Lele01g1423 464 Pfam HAUS augmin-like complex subunit 4 198 292 IPR029327 GO:0051225|GO:0070652
Lele01g1423 464 Pfam HAUS augmin-like complex subunit 4 298 453 IPR029327 GO:0051225|GO:0070652
Lele01g1423 464 PANTHER AUGMIN SUBUNIT 4 FAMILY MEMBER 7 456 IPR029327 GO:0051225|GO:0070652
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1423 Lele-ChrLele01 8753981 8759058 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1423 01 8753981 8759058 Lele01g1423 01 8753981 8759058 ECH
Lele01g1423 01 8753981 8759058 Lele04g1695 04 21577855 21583008 hybridization