Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0733 ATGGCTGCAGCCAAGCCTTGGCGGGCGCCTCCAAACCCCTCCCTTGTAACCTCCATAACTTCCCTCCTTCAAACCCTAATAAATCCCCAGAACTCTACCGTCAGTTCCCATCCCCTTAATCAATTCGCTTCTTATCTCAATCCTGACTTAGTCATCCAAGTAATTAAGAACCAGGACAACCCCTTCCGCGCTCTCTTCTTCTTCAATTGGGCTTCCAACCCTCAACCTAACCCTAACGACTACTTCCACACTCGCTCCTGTTACGTTGCCATAACCGACGTCTTACTTTCTCACGCCCTTTTCTCCACGGCCTTCTCCCTCCTAAACCACTCTCACAATGTCTCTGACTTTATCATCGCCAGATTCATCAAGGCCCTCGGTGATCGTGGCAATATCAGGGGTGCCATTCATTGGTTCCACTACGTTAAATCGTTTGAAAGAGGCCGCTGTTTGCGCTCCTATAATTCGGTTTTAGGGGTGTTGGTGAGAGCAAATCGAGTCAATTTGGCCAAGGATTTCTACGATCAGCTTGTGAAGGAAGGTGTGGTGATTCCCGATGTTTATACTTATACCACGATGATTAGGGGCTTCTGTAAAATGGGTATGGTGGAGCATGCGAGGATGGTGTTCGATGAAATGAAGTGTGACCCGAACTTGGTCACTTACAACACGATGATGAACGCATTTTGTAAGAAAGGTGATATGGAGATTGCCAAGAGGATGAAGGGAATTGTAGGGGTTTGTAATTACCCTTCATTTTGTAATTACCCGAACTTCTCACCGTTGTTTAAAGCCTTGTAG 801 0.4669 MAAAKPWRAPPNPSLVTSITSLLQTLINPQNSTVSSHPLNQFASYLNPDLVIQVIKNQDNPFRALFFFNWASNPQPNPNDYFHTRSCYVAITDVLLSHALFSTAFSLLNHSHNVSDFIIARFIKALGDRGNIRGAIHWFHYVKSFERGRCLRSYNSVLGVLVRANRVNLAKDFYDQLVKEGVVIPDVYTYTTMIRGFCKMGMVEHARMVFDEMKCDPNLVTYNTMMNAFCKKGDMEIAKRMKGIVGVCNYPSFCNYPNFSPLFKAL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0733 266 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL 30 241 - -
Lele01g0733 266 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 186 216 IPR002885 -
Lele01g0733 266 TIGRFAM PPR: pentatricopeptide repeat domain 153 186 IPR002885 -
Lele01g0733 266 TIGRFAM PPR: pentatricopeptide repeat domain 220 241 IPR002885 -
Lele01g0733 266 TIGRFAM PPR: pentatricopeptide repeat domain 188 215 IPR002885 -
Lele01g0733 266 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 150 184 IPR002885 -
Lele01g0733 266 Gene3D Tetratricopeptide repeat domain 182 243 IPR011990 GO:0005515
Lele01g0733 266 Pfam PPR repeat 153 182 IPR002885 -
Lele01g0733 266 Pfam PPR repeat 185 214 IPR002885 -
Lele01g0733 266 Pfam PPR repeat 215 241 IPR002885 -
Lele01g0733 266 Gene3D Tetratricopeptide repeat domain 50 181 IPR011990 GO:0005515
Lele01g0733 266 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 218 252 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0733 130 241 Miscellaneous Gene Families AT4G11690 35.043 5.36e-14 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0733 01 4294244 4295044 Lele01g0733 01 4294244 4295044 ECH
Lele01g0733 01 4294244 4295044 Lele04g0732 04 4476384 4477932 hybridization